Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4474 ATGGCAAATCCTCTTCTCAATTCCTTCCTAACAGCAACTCTGTTTCTGTTTCTCTTCTCCTCGCCGTCTCTGGCCGGCGATTTCATAACACCCTCTCAAAACCTCACCGACGGCGCCACTCTAGTCTCGGAAAAAGGCTTTTTCGAACTGGGTTTCTTCAGCCCAGGAAACTCCACGAATCGTTACTTGGGAATCTGGTACAAAATCATCCCGATTCGGACGATCGTTTGGGTCGCCAACAGGGAGAAACCCATCAACGATTCCTCCGCCGTTTTCAAAATCAACGCCACCACGAGCAGTCCCGTTCTTCTCCAAAACGACGCCGTTGTTTGGTCTGGAGAATCGTTGAACCCAGTGGGAAATCGAAATGGGAATCTCCAACTCCAGCTCTTGGACAACGGAAATCTGGTGCTGAAAGACGCAAAATCGGAGGAAATTTCATGGCAGAGCTTCGATTACCCAACGGACACATTACTCCCCGGAATGAAGCTCGGATGGGACTTCAAAAACGGAATCCACCGCCGATTATCCGCCTGGAAAACCCCCGACGACCCATCTCCGGGGAGTCTAACAATGGAAATGATGAAAACCAACTACCCAGAACCAGTGATGTGGAACGGCTCGAAGGAGTTCATGAGAAGCGGCCCATGGAACGGCCTTCAATTCAGCGCCAAACCCACCGCGGCTCTACGAATTCTAGTCTACAACTACACAAACAACCAAACCGAGCTCACTTACAGCTACAACCTCATAAATTCCTCGCTAATCGGAAGAATGGTGTTGAATCAAACACTCTTCCGACGAGAGGCTCTGCTCTGGTCGGAATCGGAGAACAATTGGAAGCTCTACGCCACGATGCCGAGGGATTACTGCGACACATACGGACTCTGCGGCGCGTTTGGGAGCTGCAACATCGAGCAAATGCCGGCGTGTCAATGCTTAAAAGGGTTTCATCCAAAAGTGCAGGAGAAATGGAATCTGATGGATTACGCAGATGGGTGTGTGAGAAATCGGGCGTTGAATTGCTCGACTGATAAAATTGGGTTTGCGAAGCTGCCGGGGCTGAAACTGCCGGATACAAAACTGTCGTGGATTAATGAGAGTATGAGCTTGAGCGAGTGCAGAGACGAGTGTTTGAGGAATTGTTCTTGTGTGGCGTTTGCGAATACGGATGTTAGGGGATCGGGAAGTGGGTGTGCGATTTGGGTTGGGGATCTTGTTGATATTAAAGTGGTTCGAGGAGGAGGGCAGGATTTGTTTGTTAAAATGTTGGCTTCTGAATTGGAGACGAAGAAGACGAGCTCGGTTGTCGTCGGCGTGATCGTCGGAGTGGCGGTTCTTGTGATTGCTGGTTTGGTTTTGGTTGGGTTTTACATTATCAGAAGTAAGAGGAAACGAAGCCTTGAAGAAGGAATAGGCAAGGATCTTGAAGGGCAAGAAGAAGACTTAGAGCTCCCATTATTCGATTTAACAACAATATCTAATGCCACGGATAATTTTTCCAACTCCAACAAGCTTGGAGAAGGTGGTTTTGGTGCAGTCTTTCGGGGTAGACTTGTAGATGGACATGAAATTGCGGTAAAGAGACTTTCTAGCTATTCGAGACAAGGGATTGATGAATTCAAGAATGAAGTGATACTCATCGCCAAACTTCAACATCGAAATCTTGTAAAACTTTTGGGATGTTGCATCCAAGGGGAGGAAAAGATGTTGATTTATGAGTACATGCCTAATAAGAGTTTGGACTCCTTCATATTTGATCCAGTTAAAAGAAAACTTTTAGATTGGTCTAAAAGATTCAATATCATATGCGGAGTAGCTAGAGGAATTCTTTATCTTCATCAAGATTCGAGATTGAGGATTATACACAGGGATTTAAAAGCAAGTAATGTTTTGCTTGATATTGATATGAATCCAAAAATCTCGGATTTTGGAATGGCTAGAACATTTGGAGGGGATCAAACGGAAGGAAATACTAGGAGAGTTGTTGGAACATATGGATATATGGCACCAGAATATGCCATTGACGGACAATTTTCCATCAAGTCAGATGTCTTTAGTTTTGGTATTTTGTTGTTGGAGATCATATGTGGAGAGAAGAATAGAGGATTTTTTCGCCCTAATCATTCTCTCAACCTCATTGGACATGCATGGAAGTTATGGAAGGAAGGAAAACCATTAGAGTTGATTGATGCAACCATTGGAGAGTCATATTGTCTATCTGAAGTGGTGCGATGCATCCATGTGAGCCTTTTATGCTTGCAACAACATCCAGAGGATAGACCAACTATGTCAAATGTGGTTTTAATGCTAAGTAGTGAGAGTGCTTTAGGGCAACCAAAACAACCAGGATTTTATATGGAAAGGGATTCTCTCGAAGCTGATTCTCTTTTAGGCAAGAATGAATCTTCAACTACCAATGAATTAACTATTTCCCTAATGGAGGCTAGATAG 2454 44.66 MANPLLNSFLTATLFLFLFSSPSLAGDFITPSQNLTDGATLVSEKGFFELGFFSPGNSTNRYLGIWYKIIPIRTIVWVANREKPINDSSAVFKINATTSSPVLLQNDAVVWSGESLNPVGNRNGNLQLQLLDNGNLVLKDAKSEEISWQSFDYPTDTLLPGMKLGWDFKNGIHRRLSAWKTPDDPSPGSLTMEMMKTNYPEPVMWNGSKEFMRSGPWNGLQFSAKPTAALRILVYNYTNNQTELTYSYNLINSSLIGRMVLNQTLFRREALLWSESENNWKLYATMPRDYCDTYGLCGAFGSCNIEQMPACQCLKGFHPKVQEKWNLMDYADGCVRNRALNCSTDKIGFAKLPGLKLPDTKLSWINESMSLSECRDECLRNCSCVAFANTDVRGSGSGCAIWVGDLVDIKVVRGGGQDLFVKMLASELETKKTSSVVVGVIVGVAVLVIAGLVLVGFYIIRSKRKRSLEEGIGKDLEGQEEDLELPLFDLTTISNATDNFSNSNKLGEGGFGAVFRGRLVDGHEIAVKRLSSYSRQGIDEFKNEVILIAKLQHRNLVKLLGCCIQGEEKMLIYEYMPNKSLDSFIFDPVKRKLLDWSKRFNIICGVARGILYLHQDSRLRIIHRDLKASNVLLDIDMNPKISDFGMARTFGGDQTEGNTRRVVGTYGYMAPEYAIDGQFSIKSDVFSFGILLLEIICGEKNRGFFRPNHSLNLIGHAWKLWKEGKPLELIDATIGESYCLSEVVRCIHVSLLCLQQHPEDRPTMSNVVLMLSSESALGQPKQPGFYMERDSLEADSLLGKNESSTTNELTISLMEAR 817
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 110203536 110207310 + Tan0015648.1 Tan01g4474 741898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4474 817 SMART serkin_6 500 771 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4474 817 ProSitePatterns Protein kinases ATP-binding region signature. 506 528 IPR017441 GO:0005524(InterPro)
Tan01g4474 817 ProSiteProfiles Bulb-type lectin domain profile. 26 151 IPR001480 -
Tan01g4474 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 464 575 - -
Tan01g4474 817 CDD B_lectin 35 154 IPR001480 -
Tan01g4474 817 Pfam Protein tyrosine and serine/threonine kinase 503 769 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g4474 817 PIRSF SRK 1 817 IPR024171 GO:0004674(InterPro)
Tan01g4474 817 SUPERFAMILY Protein kinase-like (PK-like) 484 771 IPR011009 -
Tan01g4474 817 Pfam S-locus glycoprotein domain 213 320 IPR000858 GO:0048544(InterPro)
Tan01g4474 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g4474 817 CDD PAN_AP_plant 340 422 - -
Tan01g4474 817 Pfam Domain of unknown function (DUF3403) 772 817 IPR021820 GO:0004674(InterPro)
Tan01g4474 817 Gene3D Hepatocyte Growth Factor 342 420 - -
Tan01g4474 817 SMART blect_4 32 154 IPR001480 -
Tan01g4474 817 ProSiteProfiles Protein kinase domain profile. 500 777 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4474 817 Pfam PAN-like domain 342 409 IPR003609 -
Tan01g4474 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 151 - -
Tan01g4474 817 SMART ntp_6 344 423 IPR003609 -
Tan01g4474 817 Gene3D - 22 151 IPR036426 -
Tan01g4474 817 ProSiteProfiles PAN/Apple domain profile. 342 424 IPR003609 -
Tan01g4474 817 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 26 785 - -
Tan01g4474 817 Gene3D Phosphorylase Kinase; domain 1 475 575 - -
Tan01g4474 817 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 185 IPR036426 -
Tan01g4474 817 CDD STKc_IRAK 506 771 - -
Tan01g4474 817 Gene3D Transferase(Phosphotransferase) domain 1 576 782 - -
Tan01g4474 817 Pfam D-mannose binding lectin 74 180 IPR001480 -
Tan01g4474 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 576 779 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1622 Tan-Chr1:16430635 Tan01g4474 Tan-Chr1:110203536 1.70E-276 dispersed
Tan01g1623 Tan-Chr1:16430635 Tan01g4474 Tan-Chr1:110203536 5.60E-222 dispersed
Tan01g4474 Tan-Chr1:110203536 Tan05g3193 Tan-Chr5:83983092 1.00E-217 dispersed
Tan05g3160 Tan-Chr5:83541263 Tan01g4474 Tan-Chr1:110203536 3.80E-98 dispersed
Tan05g3196 Tan-Chr5:83998996 Tan01g4474 Tan-Chr1:110203536 1.20E-72 dispersed
Tan05g3197 Tan-Chr5:84010897 Tan01g4474 Tan-Chr1:110203536 4.10E-87 dispersed
Tan06g0366 Tan-Chr6:2905665 Tan01g4474 Tan-Chr1:110203536 2.00E-130 transposed
Tan01g4474 Tan-Chr1:110203536 Tan05g0833 Tan-Chr5:6404285 4.00E-145 wgd
Tan01g4474 Tan-Chr1:110203536 Tan05g3187 Tan-Chr5:83916792 9.60E-200 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67141 PF07714 PK_Tyr_Ser-Thr 3.90E-48 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4474 - - - 0.0