Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4496 ATGGACTCTCATCAACTGTTTGGATTTGGAGTAAATAGTGCAGGCCTTTCATATACTTCTTCGTATTCCTCTGTTCCATCTTTGCCTAATAGTTTGCTTGGACCCTTGAAATATAATCTAAGAAATTCCCCGGCATCACCTTCGTCGTTGTTTTCGTCGCATTTTGAATTGGATTCCTTTACGGCAACCACTGTGAGTGATAGTCAGGATCAAAGGAACTCCCCTGAGTATCTATCTGGGCTTAGCCCTTCTTGTAATTCGTCGTTTGAAACGAGTAGCTTTAATCAAATAGCATCGCCATATTTGGATCATTGTGAGGAAGAGAGTCGACGATTCTATTCAGGGTCGAATGCGTTTGTTTACGATGGTTACTCGACTGACAACATAAGCTACGCGTTGAAACAATTGGAGAGTGCTCTGATGGGGCCGGATAATGAGGAAGTTGTGAGCAAGCCTGATGCTTCGTTTGGAGAGAGTAGCAGGCCACAAATGATGGGGCAGAGGTCCTACTCATGGAGCCAAGATCGACGGGATGGGCCATATCTTGTCCAGTCTCAGACGTTGCCAGTGTTGAGAAGCCAACAATCTGAAGCAGTTCACTTGGGGAAACGCCAGAAATCGATAGATGAATCGATGTTGCAGCAGGGAGGATTTCCATCTGATAATTTGAAGGAGTTGCTGATTGCTTGTGCAAAAGCTTTAGCTGAAAACAGGATGGAGGATTTTGATAACTTGGTTGCCACAGCTAGAGGCGCCGTGTCTATCAGCGGAGAACCGATCCAGCGTCTTGGCGCTTATATGGTGGAAGGGCTGGTGGCGAGGAAAGAGGAATCAGGGGCAAATATATACCGTGCTCTAAACTGTAGAGAGCCTGCAAGTGATGATTTGCTATCTTATATGCATATGCTATATGAAATCTGCCCGTACTTGAAGTTTGGTTACATGGCAGCAAACGGGGCGATTGCCGAAGCCTGCAGAAACGAAGACCGCATCCACATCATAGACTTCCAGATTACTCAGGGGACGCAGTGGTTAACTCTTCTTCAGGCACTTGCAGCAAGGCCCAGTGGGGCTCCCCATGTGAGGATAACTGGTATCGACGACCCTGTTTCTAAATATGCCCGTGGTGATGGGCTGGAGGTCGTGGAGCGGCGGTTGGCTGAAATCTCCATGAAGTACGGAATTCCAGTAGAGTTTCATGGAGTACCCGTTTTCGCTCCAGACATCACGCTTGATATGCTCGACATCAGACCTGGGGAGGCTCTGGCTGTAAACTTCCCATTGCAACTTCATCATACCCCGGACGAAAGCGTTGACGTGAACAATCCACGTGACGGTCTGCTGAGAATGGTGAAGTCATTATCCCCAAAGGTAGTAACTCTGGTAGAGCAAGAATCAAACACCAACACAACCCCTTTCTTCAACAGGTTTGTGGAAACTTTAGATTACTACTTGGCAATCTTTGAGTCCATTGATGTCACTCTACCAAGGAACAACAAGAAGCGCATCAATGTTGAGCAACATTGTTTGGCAAAAGATATCGTTAACGTCATTGCTTGCGAGGGGAGGGAACGAGAAGAGCGCCACGAGCTCTTCGGCAAGTGGAAATCGAGGTTGACAATGGCAGGGTTCTGCCAGTTCCCTTTGAGCTCTTACGTCAACTCCGTCATCAGGAGCTTGCTCAGGTGTTATTCGGAGCATTACACTCTCGTCGAAAAAGATGGAGCAATGCTGCTGGGATGGAAAAACAGGAACTTGATATCTGCATCGGCCTGGTATTGA 1782 47.31 MDSHQLFGFGVNSAGLSYTSSYSSVPSLPNSLLGPLKYNLRNSPASPSSLFSSHFELDSFTATTVSDSQDQRNSPEYLSGLSPSCNSSFETSSFNQIASPYLDHCEEESRRFYSGSNAFVYDGYSTDNISYALKQLESALMGPDNEEVVSKPDASFGESSRPQMMGQRSYSWSQDRRDGPYLVQSQTLPVLRSQQSEAVHLGKRQKSIDESMLQQGGFPSDNLKELLIACAKALAENRMEDFDNLVATARGAVSISGEPIQRLGAYMVEGLVARKEESGANIYRALNCREPASDDLLSYMHMLYEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQITQGTQWLTLLQALAARPSGAPHVRITGIDDPVSKYARGDGLEVVERRLAEISMKYGIPVEFHGVPVFAPDITLDMLDIRPGEALAVNFPLQLHHTPDESVDVNNPRDGLLRMVKSLSPKVVTLVEQESNTNTTPFFNRFVETLDYYLAIFESIDVTLPRNNKKRINVEQHCLAKDIVNVIACEGREREERHELFGKWKSRLTMAGFCQFPLSSYVNSVIRSLLRCYSEHYTLVEKDGAMLLGWKNRNLISASAWY 593
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 110541079 110543851 - Tan0014132.1 Tan01g4496 741920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4496 593 ProSiteProfiles GRAS family profile. 214 593 IPR005202 -
Tan01g4496 593 MobiDBLite consensus disorder prediction 156 176 - -
Tan01g4496 593 Pfam GRAS domain family 223 592 IPR005202 -
Tan01g4496 593 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 195 592 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Tan01g4496 593 MobiDBLite consensus disorder prediction 145 176 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4496 Tan-Chr1:110541079 Tan05g0965 Tan-Chr5:7949260 1.10E-139 dispersed
Tan01g4496 Tan-Chr1:110541079 Tan05g0414 Tan-Chr5:2914749 4.60E-50 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26566 PF03514 GRAS 7.30E-128 CL0063 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4496 K27748 - csv:101216606 1021.92