Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4499 ATGCCAACAGTTTGGTTTTCTTTGAAAAAGTCCTTCCCCTGCAAACCAGAGCCATCAGAAGTCTATGATCCAAAGTGCAGGAAACAACTCAACACAATCACAACAAAGAAAGCAGCCAAAAAGTCAGGCTGTTCTTCTGGAAGATCAGGCTGTTCAAGGTCCATAGCAAATCTCAAAGATGTCATCCATGGAAGCAAGAGGCACATGGAAAAGCCACCAATTTGCAGCCCGAGGTCGATCGGTAGCAGCGAGTTCCTCAACCCGATTGCTCACGAAGTAATACTCAGCAACTCAAAGTGTGAGCTCAAGATCACTGGTTTTGGGGGCTTCCACCAAGAGGGTGTGGGAAATTCTGGCTTTGGCGGAGGCGGGGGTGGGAATTCGCCATTTTTCGGTACTTTAAGGCCTGGAACGCCTGGTCCGGGGGAGAATTTTGTTAACAACTCCAATTCTCCTTTTAGTACTGCCTCCATGACTTCTGCAAGAAAGCTACCTTCTCCTTTATCATATAGAGATGGCTCTGCAGGTGGGAGTACTGCAAAATCTAAGGGAGGTGGGGAAATTCATCCAAGCAAAAGGTTCTCGCCGCTAACCGAATCTAACGGTAATATGTTTTCAGCTGTTACTTGTCATAAATGCGGAGAGCAGTTCTGCAAATTGGAGGCTGCTGAGTCTCACCATCTCTCCAAGCATGCTGTTACTGAGCTTGTGGAAGGTGATTCGTCGAGGAAAATCGTCGAAATAATATGTCGAACGAACTTGTTGAAGTCGGAGAACAATGGAAACCGAATCGATCGAGTTTTCAAAGTTCACAATATGCAGAAAACATTAGCTGGATTTGAAGAATACAGGGAAATGGTGAAGATCAAGGCAAGCAAGCTATCAAAGAAACACCCACGATGCCTCGCCGATGGGAATGAGCTACTGAGGTTCTTCGGGACAACTTTAGCCTGTTCTCTTGGACTAAATGGCTCCTCCAGCCTCTGCATATCACAGAAATGCAATGTCTGCAGAATCATAAGGAATGGTTTCTCAGCAAAAAAGGATATGAAAGAACAAGTTGGAGTTTTCACGACTTCGACAAGTGGAAAAGCTTACGAAACCATCGAAACGGAGAAAGAAATCTCGGTAAAGAAAGCATTGATAATCTGCAGAGTGATTGCAGGGAGGGTTCATAGGCCATTGGAGAACATACAGGACATGGTTGGCCAAACAGGGTTTGATTCTTTGGCTGGCAAAGTGGGATTACATTCCAACATTGAAGAGCTTTATTTGCTCAATTCTAGAGCTTTGCTTCCTTGCTTTGTTGTAATTTGCAAACCATGA 1326 44.87 MPTVWFSLKKSFPCKPEPSEVYDPKCRKQLNTITTKKAAKKSGCSSGRSGCSRSIANLKDVIHGSKRHMEKPPICSPRSIGSSEFLNPIAHEVILSNSKCELKITGFGGFHQEGVGNSGFGGGGGGNSPFFGTLRPGTPGPGENFVNNSNSPFSTASMTSARKLPSPLSYRDGSAGGSTAKSKGGGEIHPSKRFSPLTESNGNMFSAVTCHKCGEQFCKLEAAESHHLSKHAVTELVEGDSSRKIVEIICRTNLLKSENNGNRIDRVFKVHNMQKTLAGFEEYREMVKIKASKLSKKHPRCLADGNELLRFFGTTLACSLGLNGSSSLCISQKCNVCRIIRNGFSAKKDMKEQVGVFTTSTSGKAYETIETEKEISVKKALIICRVIAGRVHRPLENIQDMVGQTGFDSLAGKVGLHSNIEELYLLNSRALLPCFVVICKP 441
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 110613449 110615413 - Tan0013865.1 Tan01g4499 741923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4499 441 Gene3D - 238 440 - -
Tan01g4499 441 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 3 440 - -
Tan01g4499 441 MobiDBLite consensus disorder prediction 142 164 - -
Tan01g4499 441 FunFam C2H2-like zinc finger protein 232 440 - -
Tan01g4499 441 ProSitePatterns Zinc finger C2H2 type domain signature. 210 231 IPR013087 -
Tan01g4499 441 SUPERFAMILY ADP-ribosylation 233 440 - -
Tan01g4499 441 MobiDBLite consensus disorder prediction 126 198 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4499 Tan-Chr1:110613449 Tan11g1315 Tan-Chr11:11348893 5.20E-59 dispersed
Tan01g1625 Tan-Chr1:16475212 Tan01g4499 Tan-Chr1:110613449 6.00E-164 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4499 - - - 0.0