Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4501 ATGACATTTCGACGACTTATGGGTGTTGCAAAAAGGAGATGTTTGGTTGTTCTTGTGATTCTCATCTGGGTTTCTTTAGCAACTTGCTTGAAGGACCACGAGGAAGAGGAACTGATTCTGAGTCAACTAGCTGACCCAATTACTGGGGATGTCAACGCAGAGATGGCTGAGCTGTTATTGGTTAAGTGCAACTTGGATTTGTTTCAGTTGAAGGAAACTATAGATGATACCGACTCATGCTCTGAAGAAAGACCCAGAAGCACAAATGGAATTAATTTTGAATGTCGGATGCTTGCAAAAGAAAAAACAAACAGAATGCTAAGTTCCATGCATCCCCAGTTGAAGCAGGCTCTTTTAGATTGTTTAAGAAAGAATTTTCACGTCTCCGGGAAAGAGTACAATTCTGAAGCTTGGTACACCAGATATCTGGAGCCATTGCTTTTTATGCCTGGCAGTCTTAGAAGGAAATTAAGTTCTAGATGGCTTCGAAGTGCTAAAGAAGTGCCTGCTCCGGCACCTGAATCTTCAGATCCTGTATCTCCACCTCGTCCTAAATCTAAAAAAACACCATTTTTTCCACCAGATTCTGCAGATTCAGCAGATGAAAATCCTTCAAGAAAAGCTTCTAGCACAAGTGGTCAAAAAGAAAAGAAATCTAATAATCAGCAAACAGTTGTCATCGCTGTTGCGGTAACAGCAACAGTGACTTTTATCATTGTAGCTCTGCTCTTTTTATGCTATAATAAGAGTGGCTCCAGAGTGAAGCAAAATGATGAAAATCATGAAAGGCCTCTCCTAAGCTTGAGCTTAAGTTCTTCGCCCAAGTATTCTGCCTTTGGGAATTCTATTAAGGAGGACATGCTCATGAATCAATCATCTACCTTGAGTCACCACCAGAGAACTCCATCTTTGGATGGTAGCCTGCACGTTGTCTCTGATGGTGCACGTACCTCAATGCAGGGACGTCCATCTTTTGGAGCTGCTGGAGCTGCTGGAGTTGCCAATAGGTCGTCTTTTGGAACAATGAATATGGCTGGTGGTACTAATGGTGGCTTGTTGCCACCTCCTCCGGGAGCTGTGCCAGTCACCTTAGAGATTATGCCACCTCTGAAGCCTCCTCCTGGCAGGGCTGTTCCCCTGCCTCCTGAACCCCCTTCGTCTTTTAAGCCTCCATCCAACATGGCTAGTCCTCCTCCTCCACCGCCACCTTCTGCACCTTCTGCACCTTCTGCACCCCCTGCACCTCCTGCGCCACCAAGACCTCCTGGAAATTCAGCTCGCTCTCCTGGACCTCCTCCACCTCCACCACCTGTACAAGCCAACAAGGCAGGCCCTCGCCCACCACCACCTCCCAGAAGTGGTGTTGCTCCCCCTCGGCCACCTCCATTAGCACCCAAAGGTGCAAATCCACCTCGACCTCCAAAACCTTTTGGATATGATGATGAAGGTATGGACGAATCGGGTATTCCCAAAGCCAAATTGAAACCATTTTTCTGGGACAAAGTTCTTGCAAACCCTGATCATTCCATGGTCTGGCATCAGATAAAAGCAGGGTCTTTCCAATTCAACGAGGAGATGATAGAAACTCTTTTTGGATATACACCAGTTGATAAAAACAAAAGTGAGGGCAAGAAGGAGTCATCATCACAAGATCCTGTGCACCAGTACATTCAGATCATTGATTCAAAGAAAGCACAAAATCTGTCCATTCTTTTGCGGGCATTAAATGTGACAAAAGAAGAAGTTCGTGATGCGCTTCATGAAGGAGCTGAACTTCCTGCTGAACTTCTTGAGAACTTACTGAGGATGGCACCAACACCAGAAGAAGAACTCAAGCTTAGACTGTTTAGTGGGGAACTTTCTCAACTTGGAAATGCTGAGCGGTTCCTTAAGTGTTTGGTCGATATCCCATTTGCTTTCAAAAGGTTGGAATCGTTGCTTTTCATGGGCACTCTTCAGGAGGATATCACCATCACTAAGGAGTCCTTTGTTAACTTGGAGGTTGCTTGCAAGGAACTTCGAAGCAGCAGGCTGTTCCTCAAACTTCTAGAAGCTGTTCTTAAGACGGGCAATCGGATGAACGATGGAACTTTTAGAGGTGGTGCACAAGCATTCAAATTGGACACACTTTTAAAATTGTCAGATGTGAAAGGCAAAGATGGCAAGACTACACTATTGCACTTTGTAGTCCAGGAGATTATTCGCACAGAAGGGATAAGAGCTGCCCGGAACGCTACAGGAAGCCAGAGCTTCTCAAGCACCTCATCAAAGGAGCTGCTGGACGGAAGTACTAACGACACAGAAGAGCATTACCGTAACCTTGGTCTTGAGGTCGTCTCGGGGTTGAGTGGTGAACTTCAGAATGTGAAGAAAGCAGCAACCATAGATGCTGATGCCTTGACTGGAACTGTTTCCAAACTTGGCCATGCACTGTTAAGGACAAGAGACTTTGTGAACAAAGACATGGAGGGTCTAGGTGAAGAGAGTCGATTTCATGAAACCCTGAAAACCTTTGTGCAGAGTGCTGAGGTTGAAATCATGGCCCTTCTCGAAGAAGAAAAAAGAATAATGGAATTGGTAAGAAGCACGGGCGACTACTTCCATGGACATGCAGGGAAGGACGAGGGCTTACGGTTGTTTGTAATAGTGCGAGATTTCTTGATAATGATAGATAAAACATGCCGAGAGATAAAGGATGCACAGAAGAAGCAGCAGGCAAAGGGACACAGAAAGGCAGTGTCATCTTCTGATATCAATCACCCCCCCTCAACTCCAGTTGCTCCTGAAGTACGACACCCCCCCTCAGCTCCAGTTGCTCCTGAAGTATCCCCCTCAACTCCAGTTGCTCCTGAAGTACGACACCCCTCCTCAGCTCCAGTTGCTCCTGAAGTATCCCCCTCAACTCCAGTTGCTCCTGAAGTACGACACCCCCCGCCTTCTCCCGATCTGAATCGGCTGATCTTCCCAGCAATTACTGATCGTCGGATCAGTGACTCAAGTTCAGATGACGAGAGTCCATAG 3021 46.31 MTFRRLMGVAKRRCLVVLVILIWVSLATCLKDHEEEELILSQLADPITGDVNAEMAELLLVKCNLDLFQLKETIDDTDSCSEERPRSTNGINFECRMLAKEKTNRMLSSMHPQLKQALLDCLRKNFHVSGKEYNSEAWYTRYLEPLLFMPGSLRRKLSSRWLRSAKEVPAPAPESSDPVSPPRPKSKKTPFFPPDSADSADENPSRKASSTSGQKEKKSNNQQTVVIAVAVTATVTFIIVALLFLCYNKSGSRVKQNDENHERPLLSLSLSSSPKYSAFGNSIKEDMLMNQSSTLSHHQRTPSLDGSLHVVSDGARTSMQGRPSFGAAGAAGVANRSSFGTMNMAGGTNGGLLPPPPGAVPVTLEIMPPLKPPPGRAVPLPPEPPSSFKPPSNMASPPPPPPPSAPSAPSAPPAPPAPPRPPGNSARSPGPPPPPPPVQANKAGPRPPPPPRSGVAPPRPPPLAPKGANPPRPPKPFGYDDEGMDESGIPKAKLKPFFWDKVLANPDHSMVWHQIKAGSFQFNEEMIETLFGYTPVDKNKSEGKKESSSQDPVHQYIQIIDSKKAQNLSILLRALNVTKEEVRDALHEGAELPAELLENLLRMAPTPEEELKLRLFSGELSQLGNAERFLKCLVDIPFAFKRLESLLFMGTLQEDITITKESFVNLEVACKELRSSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGKDGKTTLLHFVVQEIIRTEGIRAARNATGSQSFSSTSSKELLDGSTNDTEEHYRNLGLEVVSGLSGELQNVKKAATIDADALTGTVSKLGHALLRTRDFVNKDMEGLGEESRFHETLKTFVQSAEVEIMALLEEEKRIMELVRSTGDYFHGHAGKDEGLRLFVIVRDFLIMIDKTCREIKDAQKKQQAKGHRKAVSSSDINHPPSTPVAPEVRHPPSAPVAPEVSPSTPVAPEVRHPSSAPVAPEVSPSTPVAPEVRHPPPSPDLNRLIFPAITDRRISDSSSDDESP 1006
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 110637190 110644613 - Tan0016377.1 Tan01g4501 741925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4501 1006 MobiDBLite consensus disorder prediction 203 221 - -
Tan01g4501 1006 PANTHER FORMIN-RELATED 141 1004 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Tan01g4501 1006 MobiDBLite consensus disorder prediction 354 477 - -
Tan01g4501 1006 SUPERFAMILY Formin homology 2 domain (FH2 domain) 555 913 - -
Tan01g4501 1006 MobiDBLite consensus disorder prediction 174 189 - -
Tan01g4501 1006 SMART it6_source 484 905 IPR015425 -
Tan01g4501 1006 Pfam Formin Homology 2 Domain 490 889 IPR015425 -
Tan01g4501 1006 MobiDBLite consensus disorder prediction 745 766 - -
Tan01g4501 1006 MobiDBLite consensus disorder prediction 745 761 - -
Tan01g4501 1006 MobiDBLite consensus disorder prediction 345 488 - -
Tan01g4501 1006 MobiDBLite consensus disorder prediction 900 1006 - -
Tan01g4501 1006 Gene3D Formin, FH2 domain 489 919 IPR042201 -
Tan01g4501 1006 ProSiteProfiles Formin homology-2 (FH2) domain profile. 484 916 IPR015425 -
Tan01g4501 1006 MobiDBLite consensus disorder prediction 926 944 - -
Tan01g4501 1006 MobiDBLite consensus disorder prediction 166 221 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4501 Tan-Chr1:110637190 Tan11g1841 Tan-Chr11:21780683 1.50E-24 dispersed
Tan01g2820 Tan-Chr1:56899514 Tan01g4501 Tan-Chr1:110637190 1.10E-74 transposed
Tan04g1167 Tan-Chr4:10916302 Tan01g4501 Tan-Chr1:110637190 3.40E-80 transposed
Tan04g1726 Tan-Chr4:42192022 Tan01g4501 Tan-Chr1:110637190 7.80E-97 transposed
Tan05g0849 Tan-Chr5:6637829 Tan01g4501 Tan-Chr1:110637190 1.10E-35 transposed
Tan05g1655 Tan-Chr5:45853534 Tan01g4501 Tan-Chr1:110637190 9.30E-103 transposed
Tan07g2065 Tan-Chr7:72130335 Tan01g4501 Tan-Chr1:110637190 8.10E-98 transposed
Tan09g0197 Tan-Chr9:10673567 Tan01g4501 Tan-Chr1:110637190 6.80E-98 transposed
Tan01g4501 Tan-Chr1:110637190 Tan05g0848 Tan-Chr5:6636559 1.40E-107 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4501 K28090 - csv:101213072 825.854