Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4517 ATGCGATATTCGATTCACATACTCTTTTGGCTGTTTCTTGTGTGGGTGTCCAATTTCAAGCTCTGTTTTGGACAAGATTACAACTTTGGCGATGACTCCGAGCCGGCGGCGCCGCCGCCGGAGCAAGAAAACTGTAATGGGATTTTTTTAACGTACACTTTCTTTTCAAGGGAGAGGGAATTTCCCCATGTGAAGAATGTTTCTGCTCAGTCTTGGGCGTTCAAATCTCAGGCCACCGTGCTGAACGCCGGCACGACGGAGCTCGACGCTTGGAAGATGTACATTGGTTTCCAACATGGAGAGATTTTGGTGTCGGCCGATGGCGCCGTGTTGGCCGATGGTTCGGATTTCCCCGCCGCGGTCGGCAACGGGGCGACGTTGACAGGGTACCCTCAGACTGACTTGAAAACCTCTGTAGAAACTGCAGGAGATTATAACCAGATTCAGGCGAGGATCGATATCACCGGAACGCAGTTCGGCGTCAAGAAGAACGGCGTTCCGATGCCGAAGACGATTCGCCTCGCCAACGATGGCTTTAAATGCCCTCCGCCTCGCCGTCACCGGACCAAAAGCTATATGCATGTATGCTGCAAGAAAGACCCCAAATTCAAGACGAAGACGAAGACGAAGACGACGAAGTTCTTCCCGAGACAGCACGGCGATCTCTCACTCACCTACGACGTCCTACAAGCTTTTGGCAACAACTATCTCGCTCAAGTCACCATTGACAACAACAATCCTCTCGGCCGACTCGACCATTGGAACTTAACTTGGGAATGGATGAGAGGAGAATTCATTTCCACCATGAGAGGAGCTTACACTCACAGAAGAGACTTCTCTGATTGCATCTTTGGCCCTCAAGGCCAATACTATCAAGATTTCGACTTCTCGCAGATCGTGAACTGCGAGAAGAACCCCGTCATTGCCGACCTCCCGACCGATCGAGCCAACGATTCGAAGGTCGGGAAGTTGCCGTTCTGCTGCAAGAACGGAACGATCTTACCACGGTTGATGGATGAAAGCAAAGCAAGGTCCATTTTTCAGCTACAAGTCTATAAACTTCCATCTGACTTCAACAGAACAGCCTTGTACCCTCCTCAAAAATGGAAGATAAAAGGCATTCTCAATCCCACTTACAAATGTGGAGCTCCCATAAGAGTAGAACCAACACAATTTCCTGATCCAAATGGACTTCAAGCCACAAGCACTTCCATTGCAAGTTGGCAAGTGGTTTGCAACATCACAACTCCAAAAGCCAAACAATCAAGATGCTGTGTTTCTTTCTCTGCTTATTACAATGACTCTGTTATCCCTTGCAACACTTGTGCTTGTGGGTGTGATGAAACTGAAACTTGCAACCCAAATTCTGCCCCAATGCTGCTTCCACCAGAAGCACTTTTGGTTCCATTTGACAACAGAACTGTAAAGGCAAAAGCTTGGGCCAGAATCAAACACTTTCCAATCCCCAAAAGACTCCCCTGTCCTGACAATTGTGGGGTTAGTTTAAATTGGCATATAAACTCAGATTATAGCAGTGGTTGGACTGCTAGAATCACCCTTTTCAATTGGGAAGAATACCCTTTTGAGGATTGGTTTGCAGCTGTTCAATTGAATAAAGCTGCTAAAGGATATGAAAATGTTTACTCCTTCAATGGGACTAAACTTCCACCAGATTTGATTGAGAATACCATCATGTTACAAGGATTGGAGGGTTTGAATTACCTGATGGGGGAGACGAATGGGACGAACCCAAGATTCGATCCGAGAGTACCGGGAAAGCAGCAATCGGTTATCTCGTTCAGTAAGAAGAACTTGAGGAACTTGAACATAAAGGAAGGAGATGGATTTCCCACAAAGGTGTATTTCAATGGAGAAGAGTGTGCACTTCCTCCTCATATTCCTTTAGGAAATGGTGCTGCTCGTAGCTTCCATGGATGCTCTGAGCCTCTAGTGCTGCTGCTCACAGTTATGGCTTTTTTCATTCTCTTCAGTGATGGATTTCATTGA 2007 46.89 MRYSIHILFWLFLVWVSNFKLCFGQDYNFGDDSEPAAPPPEQENCNGIFLTYTFFSREREFPHVKNVSAQSWAFKSQATVLNAGTTELDAWKMYIGFQHGEILVSADGAVLADGSDFPAAVGNGATLTGYPQTDLKTSVETAGDYNQIQARIDITGTQFGVKKNGVPMPKTIRLANDGFKCPPPRRHRTKSYMHVCCKKDPKFKTKTKTKTTKFFPRQHGDLSLTYDVLQAFGNNYLAQVTIDNNNPLGRLDHWNLTWEWMRGEFISTMRGAYTHRRDFSDCIFGPQGQYYQDFDFSQIVNCEKNPVIADLPTDRANDSKVGKLPFCCKNGTILPRLMDESKARSIFQLQVYKLPSDFNRTALYPPQKWKIKGILNPTYKCGAPIRVEPTQFPDPNGLQATSTSIASWQVVCNITTPKAKQSRCCVSFSAYYNDSVIPCNTCACGCDETETCNPNSAPMLLPPEALLVPFDNRTVKAKAWARIKHFPIPKRLPCPDNCGVSLNWHINSDYSSGWTARITLFNWEEYPFEDWFAAVQLNKAAKGYENVYSFNGTKLPPDLIENTIMLQGLEGLNYLMGETNGTNPRFDPRVPGKQQSVISFSKKNLRNLNIKEGDGFPTKVYFNGEECALPPHIPLGNGAARSFHGCSEPLVLLLTVMAFFILFSDGFH 668
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 110815503 110818698 + Tan0008915.1 Tan01g4517 741941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4517 668 Pfam COBRA-like protein 236 415 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Tan01g4517 668 PANTHER COBRA-LIKE PROTEIN 7 6 659 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1680 Tan-Chr1:17872977 Tan01g4517 Tan-Chr1:110815503 4.40E-299 dispersed
Tan01g4517 Tan-Chr1:110815503 Tan10g1052 Tan-Chr10:9420233 7.80E-224 dispersed
Tan01g4517 Tan-Chr1:110815503 Tan09g2022 Tan-Chr9:70831783 4.70E-35 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4517 - - - 0.0