Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4518 ATGGCCAAATTAGGGTTTGCATTTGGGGCTTTGATGTGTGTAATTATGTTGTTGCAGAAAAGTGAAGGCACTCAGTTCATAATTGGAGGAGCAAAGGGTTGGGGAGTTTCAGTGGCACAAAGCTATAATCAATGGGCAGAAGCAAACAGGTTTCAAATTGGAGATTCTTTAGTTTTCAACTATGCTGCTGATCAAGACTCAGTGCTTCAAGTAACACAAGATGCCTACAACAACTGCAGCATCCAATCACCAATCAAACAGTATTCTGATGGCCACACTGTTTTCCAATTTGACAAATCTGGACCTTACTATTTTATCAGTGGAAACAAAGACAATTGCCTCAAAAATGAGAAGCTGGTGGTGGTTGTTTTGGCTGATAGAAGCAATTCAAGCAATTTGCCTCCTCCAACCTCTGCTCCGTCTCCGTCACCGTCTCCGTCTCCGTCTCCAGCAAATGATCAAACTGGCGCACCTTCTCCCACACCATCCGGGTCGACTGAAATCAACCCGTCTCCTCCGCCTGCTGAGGAAACCATCCCATCTCCCCCACCTGCTGAGGAAGTCAACCCATCTCCGGTGCCTTCTGGGCAAGAGTCTCCATCTCCGCCTCCAAGGACGGTTGAGGTCAACCCTGCACCTCCTGTATCAGGACCACCTGCAAGTTTTGGATCTTCGATCATCCCGAGCAGCATTGGCTCCATTGGAGCATTTGCTGCTGCTGTTATCTTAGCTTTCTAA 738 47.56 MAKLGFAFGALMCVIMLLQKSEGTQFIIGGAKGWGVSVAQSYNQWAEANRFQIGDSLVFNYAADQDSVLQVTQDAYNNCSIQSPIKQYSDGHTVFQFDKSGPYYFISGNKDNCLKNEKLVVVVLADRSNSSNLPPPTSAPSPSPSPSPSPANDQTGAPSPTPSGSTEINPSPPPAEETIPSPPPAEEVNPSPVPSGQESPSPPPRTVEVNPAPPVSGPPASFGSSIIPSSIGSIGAFAAAVILAF 245
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 110820014 110821843 + Tan0008566.1 Tan01g4518 741942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4518 245 Gene3D - 24 135 IPR008972 -
Tan01g4518 245 FunFam Early nodulin-like protein 1 23 128 - -
Tan01g4518 245 MobiDBLite consensus disorder prediction 128 229 - -
Tan01g4518 245 MobiDBLite consensus disorder prediction 135 155 - -
Tan01g4518 245 Pfam Plastocyanin-like domain 34 115 IPR003245 GO:0009055(InterPro)
Tan01g4518 245 ProSiteProfiles Phytocyanin domain profile. 24 125 IPR003245 GO:0009055(InterPro)
Tan01g4518 245 MobiDBLite consensus disorder prediction 165 218 - -
Tan01g4518 245 PANTHER BLUE COPPER PROTEIN 16 154 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Tan01g4518 245 CDD OsENODL1_like 24 124 IPR041846 -
Tan01g4518 245 SUPERFAMILY Cupredoxins 23 124 IPR008972 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1683 Tan-Chr1:17913224 Tan01g4518 Tan-Chr1:110820014 9.00E-43 dispersed
Tan01g4518 Tan-Chr1:110820014 Tan05g0755 Tan-Chr5:5477121 2.40E-29 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4518 - - - 0.0