Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g4518 | ATGGCCAAATTAGGGTTTGCATTTGGGGCTTTGATGTGTGTAATTATGTTGTTGCAGAAAAGTGAAGGCACTCAGTTCATAATTGGAGGAGCAAAGGGTTGGGGAGTTTCAGTGGCACAAAGCTATAATCAATGGGCAGAAGCAAACAGGTTTCAAATTGGAGATTCTTTAGTTTTCAACTATGCTGCTGATCAAGACTCAGTGCTTCAAGTAACACAAGATGCCTACAACAACTGCAGCATCCAATCACCAATCAAACAGTATTCTGATGGCCACACTGTTTTCCAATTTGACAAATCTGGACCTTACTATTTTATCAGTGGAAACAAAGACAATTGCCTCAAAAATGAGAAGCTGGTGGTGGTTGTTTTGGCTGATAGAAGCAATTCAAGCAATTTGCCTCCTCCAACCTCTGCTCCGTCTCCGTCACCGTCTCCGTCTCCGTCTCCAGCAAATGATCAAACTGGCGCACCTTCTCCCACACCATCCGGGTCGACTGAAATCAACCCGTCTCCTCCGCCTGCTGAGGAAACCATCCCATCTCCCCCACCTGCTGAGGAAGTCAACCCATCTCCGGTGCCTTCTGGGCAAGAGTCTCCATCTCCGCCTCCAAGGACGGTTGAGGTCAACCCTGCACCTCCTGTATCAGGACCACCTGCAAGTTTTGGATCTTCGATCATCCCGAGCAGCATTGGCTCCATTGGAGCATTTGCTGCTGCTGTTATCTTAGCTTTCTAA | 738 | 47.56 | MAKLGFAFGALMCVIMLLQKSEGTQFIIGGAKGWGVSVAQSYNQWAEANRFQIGDSLVFNYAADQDSVLQVTQDAYNNCSIQSPIKQYSDGHTVFQFDKSGPYYFISGNKDNCLKNEKLVVVVLADRSNSSNLPPPTSAPSPSPSPSPSPANDQTGAPSPTPSGSTEINPSPPPAEETIPSPPPAEEVNPSPVPSGQESPSPPPRTVEVNPAPPVSGPPASFGSSIIPSSIGSIGAFAAAVILAF | 245 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 110820014 | 110821843 | + | Tan0008566.1 | Tan01g4518 | 741942 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g4518 | 245 | Gene3D | - | 24 | 135 | IPR008972 | - | |
Tan01g4518 | 245 | FunFam | Early nodulin-like protein 1 | 23 | 128 | - | - | |
Tan01g4518 | 245 | MobiDBLite | consensus disorder prediction | 128 | 229 | - | - | |
Tan01g4518 | 245 | MobiDBLite | consensus disorder prediction | 135 | 155 | - | - | |
Tan01g4518 | 245 | Pfam | Plastocyanin-like domain | 34 | 115 | IPR003245 | GO:0009055(InterPro) | |
Tan01g4518 | 245 | ProSiteProfiles | Phytocyanin domain profile. | 24 | 125 | IPR003245 | GO:0009055(InterPro) | |
Tan01g4518 | 245 | MobiDBLite | consensus disorder prediction | 165 | 218 | - | - | |
Tan01g4518 | 245 | PANTHER | BLUE COPPER PROTEIN | 16 | 154 | IPR039391 | GO:0009055(InterPro)|GO:0046658(PANTHER) | |
Tan01g4518 | 245 | CDD | OsENODL1_like | 24 | 124 | IPR041846 | - | |
Tan01g4518 | 245 | SUPERFAMILY | Cupredoxins | 23 | 124 | IPR008972 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g1683 | Tan-Chr1:17913224 | Tan01g4518 | Tan-Chr1:110820014 | 9.00E-43 | dispersed | |
Tan01g4518 | Tan-Chr1:110820014 | Tan05g0755 | Tan-Chr5:5477121 | 2.40E-29 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g4518 | - | - | - | 0.0 |