Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4525 ATGATCTGCGCTGTGAAACAATCTCCTGGGGCTGTCAATTGCTCCGATGCTGTTATTCGGAGCAAAATCTCGGTTCCCTCTCAGCGATCCTTGTTTCTTCCTCCTCTTCCGGTGCAAAAACGTCGGAACTCTGCTGTTTCTATTCATAAGGCTGTACATGTTTCTTCGCTTGAGAATTTTGGATGGTTTGGGGTTCGTAAAGCGAATTTGATCAAATGCGAAGCTTACGAGGCTGAGCGATCGCAGCCGATCGAATCGGGCATTGAGTTGCCGCAGAGTCAGGCCCCATCTGAGGCCGCGAAGAAGGTGAAAATAGGTTCGTACTTCGCTCTTTGGTGGGCTTTGAACGTGGTTTTCAATATCTACAACAAGAAGGTTTTGAACGCGTACCCGTATCCATGGCTGACTTCGACTCTGTCGCTTGCCGCCGGATCTCTGATCATGTTGATCTCATGGATGACGAGAATTGCTGAGGCGCCTAAAACCGATTTCGACTTTTGGAAGTCGTTGTTCCCTGTTGCTATTGCCCATACCATTGGACATGTTGCTGCTACCGTGAGTATGTCAAAAGTTGCAGTTTCATTCACTCACATCATCAAGAGTGGTGAACCTGCTTTTAGCGTATTGGTTTCAAGGCTCTTGTTGGGTGAGACCTTCCCGCTTCCTGTCTACTTGTCGCTCCTCCCAATTATCGGTGGGTGCGCTCTCGCTGCTGTGACTGAGCTCAACTTTAACATGACGGGTTTCATGGGTGCCATGATATCAAACTTGGCATTTGTATTCCGTAATATATTTTCAAAGAGGGGCATGAAGGGAAAAGCTGTTAGCGGGATGAACTACTATGCGTGTTTATCAATTTTATCTTTGTTAATCCTGACACCATTTGCATTTGCTGTGGAGGGACCACAGTTATGGGCTGCTGGATGGCAGACAGCCATATCTCAAATTGGACCTCATTTCGTTTGGTGGGTTGCAGCACAAAGTATATTCTACCATCTCTATAACCAGGTGTCTTACATGTCCTTGGATGAGATTTCTCCCTTGACGTTCAGCATTGGAAACACCATGAAACGTATTTCGGTCATTGTGTCTTCCATCATCATCTTCCGCACGCCCGTGCAGTCAGTCAACGCTCTCGGAGCTGCCATTGCAATTCTCGGAACCTTTATTTATTCGCAGGCAAAGCAATGA 1191 46.94 MICAVKQSPGAVNCSDAVIRSKISVPSQRSLFLPPLPVQKRRNSAVSIHKAVHVSSLENFGWFGVRKANLIKCEAYEAERSQPIESGIELPQSQAPSEAAKKVKIGSYFALWWALNVVFNIYNKKVLNAYPYPWLTSTLSLAAGSLIMLISWMTRIAEAPKTDFDFWKSLFPVAIAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRLLLGETFPLPVYLSLLPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKRGMKGKAVSGMNYYACLSILSLLILTPFAFAVEGPQLWAAGWQTAISQIGPHFVWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFRTPVQSVNALGAAIAILGTFIYSQAKQ 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 110984590 110988807 + Tan0012043.1 Tan01g4525 741949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4525 396 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 104 395 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Tan01g4525 396 Pfam Triose-phosphate Transporter family 104 392 IPR004853 -
Tan01g4525 396 PANTHER SOLUTE CARRIER FAMILY 35 99 395 IPR050186 GO:0005794(PANTHER)|GO:0015120(PANTHER)|GO:0015297(PANTHER)|GO:0071917(PANTHER)
Tan01g4525 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 146 239 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1685 Tan-Chr1:17939823 Tan01g4525 Tan-Chr1:110984590 2.60E-182 dispersed
Tan01g1686 Tan-Chr1:17939823 Tan01g4525 Tan-Chr1:110984590 6.70E-181 dispersed
Tan01g4525 Tan-Chr1:110984590 Tan03g2333 Tan-Chr3:77306985 3.90E-154 dispersed
Tan01g4525 Tan-Chr1:110984590 Tan05g2003 Tan-Chr5:69968059 7.20E-60 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4525 K15283 - csv:101220046 717.613