Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4590 ATGAGCCTGGATGCAGCTGAGGATGAATCAACTTCAGAAATTCATATTCCAGCAGAGATTGATTGGGATATGCTAGACAAATCCAAATTCTTTTTTCTGGGTGCTGCTTTATTTTCAGGTGTATCAACTGCCCTTTATCCTATTGTTGTTTTGAAAACTCGACTTCAGGTTTCTACTACCAAGCTATCAAGCTTCAAAATGTCACATTCTATCATGCGCCATGAAGGTTTAAGAGGGTTTTACAGAGGGTTTGGAACCTCTTTAATGGGAACTATCCCAGCTCGAGCTTTCTACATGGCAGCTCTTGAAGTTACCAAGAGTGGCGTTGGAAGTGCAACGGTTAGACTAGGCTTTTCAGACACCACAGCCATGGCTATAGCTAATGGAGCTGCAGGGTTGAGCTCAGCCATGGCTGCTCAATTGGTCTGGACTCCAATAGATGTTGTGAGCCAAAGACTAATGGTTCAGGGCTGCAATAGCAGTGCTAAAAACAGGGTTTCTAATCTTAATTCTTGCGTCTATAAAAATGGTATTGACGCTTTCCGAAAGATCATTTATGCTGATGGTTTTCGAGGATTATACAGGGGATTTGGGATTTCAATCTTGACATATGCTCCATCGAATGCAGTTTGGTGGACTTCTTACTCTGTAGCTCACAGGCTCATTTGGAGTGGTCTAGGCTGCTACAATAGTAAGAAGGATGAGAGTTTTGGCTTTAAAGCAGACTCTAAGGCAACAGTGGCAGTTCAGGGGTTGAGTGCAGCGTTGGCCAGTGGGGTCTCTGCTATCATAACAATGCCACTGGATACCATCAAGACTAGATTGCAAGTTTTGGATGCAGAAGAGAACGGCCAAAGACGCCCTCTAACAGCATTGCAGACTGTAAGGAACTTGGTGAAGGAAGGTGGGCTGAATGCTTGTTACCGAGGGCTTGGGCCAAGGTGGGCGTCCATGGCCATGTCGGCCACCACCATGATCACAACCTATGAGTTTCTCAAACGGCTATCTGCGAAGAACCAAAACTGTTTGAGCTGA 1035 45.12 MSLDAAEDESTSEIHIPAEIDWDMLDKSKFFFLGAALFSGVSTALYPIVVLKTRLQVSTTKLSSFKMSHSIMRHEGLRGFYRGFGTSLMGTIPARAFYMAALEVTKSGVGSATVRLGFSDTTAMAIANGAAGLSSAMAAQLVWTPIDVVSQRLMVQGCNSSAKNRVSNLNSCVYKNGIDAFRKIIYADGFRGLYRGFGISILTYAPSNAVWWTSYSVAHRLIWSGLGCYNSKKDESFGFKADSKATVAVQGLSAALASGVSAIITMPLDTIKTRLQVLDAEENGQRRPLTALQTVRNLVKEGGLNACYRGLGPRWASMAMSATTMITTYEFLKRLSAKNQNCLS 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 111933046 111935392 - Tan0005878.1 Tan01g4590 742014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4590 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Tan01g4590 344 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 6 341 - -
Tan01g4590 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 245 335 IPR018108 -
Tan01g4590 344 Gene3D Mitochondrial carrier domain 29 342 IPR023395 -
Tan01g4590 344 Pfam Mitochondrial carrier protein 39 108 IPR018108 -
Tan01g4590 344 Pfam Mitochondrial carrier protein 245 338 IPR018108 -
Tan01g4590 344 Pfam Mitochondrial carrier protein 126 222 IPR018108 -
Tan01g4590 344 SUPERFAMILY Mitochondrial carrier 23 332 IPR023395 -
Tan01g4590 344 PRINTS Mitochondrial carrier protein signature 40 58 IPR002067 GO:0055085(InterPro)
Tan01g4590 344 PRINTS Mitochondrial carrier protein signature 81 99 IPR002067 GO:0055085(InterPro)
Tan01g4590 344 PRINTS Mitochondrial carrier protein signature 132 154 IPR002067 GO:0055085(InterPro)
Tan01g4590 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 221 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4590 Tan-Chr1:111933046 Tan11g0423 Tan-Chr11:3418696 1.00E-70 dispersed
Tan10g1104 Tan-Chr10:10667598 Tan01g4590 Tan-Chr1:111933046 1.40E-64 transposed
Tan01g4590 Tan-Chr1:111933046 Tan06g0146 Tan-Chr6:1343377 2.00E-127 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4590 K15121 - csv:101213436 610.527