Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4633 ATGTCGAAAATGAAACATCTTCTTCGAAAGCTTCACATCGGTGGGGGACTTAATGAGCACCAGCGATTGAGCGATGCCCGACCTGTGACGCGACCCAGTTCGACCCCCAGTCCAGGCCCAAGCCCCAATAGTAATCCATCGGCTTCGTCTTCTTCTGGGTCGTCTTCGTCTTTGGCTATGGCCTCTTCCACTACAATGGGGAGATTGGAGGCCGTTGAATCGGTCGTTGATCGGACGGCTTCTGGGGATGTCGGCGGTGGCTGCGTCGATTTCAATGCCTTGGAGGAGGAGTTTCAGGTTCAATTGGCTATGGCGATTAGCGCTTCCGATCCTGATTCGAGACAAGACACTGAGTCCGCTCAGATCGATGCCGCTAAGCGGATGAGCCTTGGCTGTTCGCCTTCCGTCTCCGGCAGTCAAGCCCTCGCCGAATTTCTCTCGCTTCAGTATTGGAGCTATAATGTTGTAAATTATGATGAAAAAGTGATGGATGGATTTTATGACTTATACGGCATTACTGCAAACTCTAGCACCCGAGGAAAGATGCCACTGTTAGTTGATCTTAAAGAAATATGTGTTACAAGTGATATTGATTATGAAGTTATTTTGGTGAACCGCATGCGTGATGCTGAACTTCAACAGTTGGAGAGACAAGCATATAACATATTCATGGATTGCAGAGTTTCTGAATATGGCTTCATTTTAAGTGGACTGGTTCAAAAAATTGCTGACATAGTTGTTGCTAGAATGGGTGGTCCTGTTGGTGATGCTGAAGAAATGTTGAGAAGGTGGACCCTCAGGAGTTATGAGTTGCGTAGTTCTCTGAACACAATTATTCTACCACTTGGACGCCTTGATATTGGACTTGCACGTCATAGAGCTTTGCTTTTTAAGGTACTAGCTGATAGGATTAATCTTCCATGCATACTTGTCAAAGGAAGCTACTACACTGGTACTGATGATGGAGCTGTGAATATGATCAAAATTGATAATGGAAGTGAATACATTATTGATCTTATGGGTGCTCCAGGCACTCTAATTCCCTCAGAGGCACCCAGCTGTCAATTTTCGAATTATGGCTTTGATAGGAGACCCGCAGATGTTATAGCAGTTCCTGAAGATATGCCGGTATTACAAAATGAAGGAACTGAAGCTGTATCGATTTCATCTACTCAAGATGGAGTAGCAAATGTTTGCAACTTAATATCCAAAGAAGCTTCAGATTTAGGTGTTCAATCAAAAGAAAACGGTAGGAGCTTTATTGATGAAATTCAAACTGGGAGTTCTGATTATGATTTTGGGAAGCTTCTAGAATCAGAAAGCATTGCATGTGAAAGTTCATCGGGTGCATGTGCACAGTCAGCATCTGCACAAAAGAAGAAAGTTAAAAAAGTATCAAAGTATGTCATAAGTGCTGCAAAGAACCCAGAGTTTGCACAGAAATTACATGCTGTCTTGTTAGAGAGTGGTGCATCACCTCCTGCAGATTTGTTTTCAGATATAGATTCACAGGATAATGGTGAAAGGAAAGCGATTCACCAACTGTATCCAATCAATGGAAAAGGTATGGATGTTGGGCTTCAGTGCGACCCTTTTGTGTTAGCAAGCCAGGGGCAGTCTTCTGCTACTTCTACTGAAGCAGAGTATTTGAACAATGTTGTCCATGAAAATAAGCAGAAAGCGTCTACTGAGGGATCAACTGAAGAACAAAAACCTGAGACAAATGCGAACAAACATGGTATTTTTTGGCCTCACAGTATGACAAATGAGGGGTTTGTGTTTGTTGATGTTAATGGTGAAGCAGGCAAATTGGTTGATGTTAATGGCATTTTTCATCGTGAACATGTGAATGGTGTTGCGTTAACCTCTGATGCCAACTCTCATAAAAAACAACTAGGAAGTGCCTTAGTGGATGGAGAAAGAAGATGGCTGCAAGATAAGAGTGGTGGAACTCTTCAGTGCTTTGATTTTCGTGAAAATCCATTGGGAAATTTGATAGAACTTGATGATAGTAACCTGCATGCTAGTGATGGCCACAGTGAGACAACTAACCCAATATTAGGTGAAGTAGCAGAATGGGAAATTCCTTGGGAGGATCTTCACATTGGTGAACGTATTGGTATTGGCTCATATGGCGAGGTTTATCGAGCAGATTGGAATGGCACTGAAGTTGCCGTGAAGAAGTTCTTGGACCAAGATTTTTCCGGTGCTGCTTTGGTTCAATTAAAATGTGAAGTCGAAATCATGTTAAGACTGAGGCATCCTAATGTTGTCCTTTTCATGGGAGCGGTCACTCGCCCTCCTCATTTCTCTATCCTTACAGAGTTTCTTCCCAGGGGAAGTTTGTATAGGTTACTGCATCGTCCCAATTCTCAACTCGATGAAAGGAGGCGGTTGAGAATGGCTCTTGATGTGGCCAAAGGAATGAACTACTTGCACACAAGTCATCCGACCATTGTTCACAGAGATCTAAAGTCTCCCAATCTCCTTGTTGATAAAAACTGGGTTGTCAAGGTTTGTGATTTTGGTTTGTCACGTGTCAAGCAGAATACATTTCTGTCTTCAAAGTCAACTGCTGGAACGCCTGAATGGATGGCGCCAGAAGTTCTAAGGAATGAACCAGCCAACGAGAAGTGTGATGTGTATAGTTTTGGTGTGATCTTGTGGGAGTTGACCACATGCCGCATACCGTGGAAAGGTTTGAACCCGATGCAGGTTGTAGGAGCTGTCGGATTCCAGAATAGGCGCCTGGAGATTCCAGAAGATGTCGATCCAGCAGTTGGACAGATCATTTGTGATTGTTGGCAAACGGACACGCATCTGAGGCCGTCGTTCTCTCAGCTTATTACTCGATTGCGACGCCTTCAACGGCTTGTTCAGAAAACGAACTCCGGGAATCTAATATTGGAGTGA 2913 43.73 MSKMKHLLRKLHIGGGLNEHQRLSDARPVTRPSSTPSPGPSPNSNPSASSSSGSSSSLAMASSTTMGRLEAVESVVDRTASGDVGGGCVDFNALEEEFQVQLAMAISASDPDSRQDTESAQIDAAKRMSLGCSPSVSGSQALAEFLSLQYWSYNVVNYDEKVMDGFYDLYGITANSSTRGKMPLLVDLKEICVTSDIDYEVILVNRMRDAELQQLERQAYNIFMDCRVSEYGFILSGLVQKIADIVVARMGGPVGDAEEMLRRWTLRSYELRSSLNTIILPLGRLDIGLARHRALLFKVLADRINLPCILVKGSYYTGTDDGAVNMIKIDNGSEYIIDLMGAPGTLIPSEAPSCQFSNYGFDRRPADVIAVPEDMPVLQNEGTEAVSISSTQDGVANVCNLISKEASDLGVQSKENGRSFIDEIQTGSSDYDFGKLLESESIACESSSGACAQSASAQKKKVKKVSKYVISAAKNPEFAQKLHAVLLESGASPPADLFSDIDSQDNGERKAIHQLYPINGKGMDVGLQCDPFVLASQGQSSATSTEAEYLNNVVHENKQKASTEGSTEEQKPETNANKHGIFWPHSMTNEGFVFVDVNGEAGKLVDVNGIFHREHVNGVALTSDANSHKKQLGSALVDGERRWLQDKSGGTLQCFDFRENPLGNLIELDDSNLHASDGHSETTNPILGEVAEWEIPWEDLHIGERIGIGSYGEVYRADWNGTEVAVKKFLDQDFSGAALVQLKCEVEIMLRLRHPNVVLFMGAVTRPPHFSILTEFLPRGSLYRLLHRPNSQLDERRRLRMALDVAKGMNYLHTSHPTIVHRDLKSPNLLVDKNWVVKVCDFGLSRVKQNTFLSSKSTAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELTTCRIPWKGLNPMQVVGAVGFQNRRLEIPEDVDPAVGQIICDCWQTDTHLRPSFSQLITRLRRLQRLVQKTNSGNLILE 970
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 112249560 112261127 + Tan0013079.1 Tan01g4633 742057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4633 970 SUPERFAMILY Protein kinase-like (PK-like) 683 950 IPR011009 -
Tan01g4633 970 Pfam Protein tyrosine and serine/threonine kinase 700 952 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g4633 970 MobiDBLite consensus disorder prediction 44 63 - -
Tan01g4633 970 Pfam Ethylene-responsive protein kinase Le-CTR1 143 347 - -
Tan01g4633 970 PANTHER SERINE-THREONINE PROTEIN KINASE 41 955 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Tan01g4633 970 FunFam Serine/threonine-protein kinase isoform 1 691 778 - -
Tan01g4633 970 SMART serkin_6 700 959 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4633 970 ProSiteProfiles Protein kinase domain profile. 700 959 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4633 970 MobiDBLite consensus disorder prediction 12 63 - -
Tan01g4633 970 ProSitePatterns Protein kinases ATP-binding region signature. 706 728 IPR017441 GO:0005524(InterPro)
Tan01g4633 970 Gene3D Phosphorylase Kinase; domain 1 693 777 - -
Tan01g4633 970 Gene3D Transferase(Phosphotransferase) domain 1 779 965 - -
Tan01g4633 970 PRINTS Tyrosine kinase catalytic domain signature 813 831 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g4633 970 PRINTS Tyrosine kinase catalytic domain signature 774 787 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g4633 970 PRINTS Tyrosine kinase catalytic domain signature 879 901 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g4633 970 PRINTS Tyrosine kinase catalytic domain signature 860 870 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g4633 970 PRINTS Tyrosine kinase catalytic domain signature 923 945 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g4633 970 FunFam Serine/threonine-protein kinase CTR1 779 962 - -
Tan01g4633 970 CDD STKc_MAP3K-like 706 952 - -
Tan01g4633 970 ProSitePatterns Serine/Threonine protein kinases active-site signature. 819 831 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4633 Tan-Chr1:112249560 Tan05g2200 Tan-Chr5:72948055 2.50E-194 dispersed
Tan10g0092 Tan-Chr10:1193348 Tan01g4633 Tan-Chr1:112249560 4.40E-15 dispersed
Tan01g4633 Tan-Chr1:112249560 Tan03g1173 Tan-Chr3:68064574 4.60E-116 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67147 PF07714 PK_Tyr_Ser-Thr 2.40E-64 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4633 K04424 - csv:101214554 1635.93