Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4645 ATGGGAATCTGTATATCCACTGCATCTTCTCAGATTCGCCATGAAACTAAAGTTGGGGCTATTTGTACAACAAACGACCTCGTTTTTGAAGAAGATTATAGCTTTATCTGTGGGATTCAGAAACTCGATTCCATTTGTTCCAAGCAAGGAAGCAAAGGGCTCAACCAAGATGCCGCCTTTTTCCATCAGGAGTGCGGAGAACAGGACACGGCTTTGTTTGGAGTATTTGATGGGCATGGAAAAAATGGTCATATCGTCAGCGACATAGTGAAGAACAGACTGCCTTCGCTGTTGCTTGGGCAGAGAAATGCTATGTCAAAAAATGAAACAAATTTGGAATTAGAAAGGGATTCTGAAGATCACTTTGATGTTAGAGATGGGGAATTTGTGCAAAGTAAGAATTTCGTATCGTGGAAAGAAGCTGTTGTGACTGCCTTCAAGGTGATGGATAAAGAGATCAAACTTCAAGAGAATTTGGATTGCTTGTACAGTGGAACCACCGCTGTTATTGCTCTCAAACAGGGAGAAGATTTGGTGATTGCAAACTTGGGGGATTCAAGGGCAGTGATGGGGAGAATGACAGAGGATGGAATGAAGGGCATTCAATTAACGACTGATTTGAAGCCTGGTTTGCCGAATGAGGCTGAGCGGATAAGGAAGTGTAATGGTAGAGTGTTGGCTTTAAAAGAAGAACCGCATATACAGAGAGTGTGGTTGCCGAATGAAGACGCGCCGGGGCTGGCCATGTCCAGAGCTTTTGGAGATTTTGCTCTTAAAAACCATGGCATTATTGCTCTTCCCGACGTCTCCTACCGCCGTCTTACTTCCGACGACCACTTCATCCTGCTCGCCACTGATGGGATTTGGGATGTGCTAAGCAACAACCAAGTAGCGTCGATCGTGTGCGCGGCGGAGAGCGAAGAAGCGGCAGCGAAAGCGGTGGTGGAGGCGGCGGCGGTGGCTTGGAAACGCTATCCTGCTTCCAAACTCGACGACTGCACCGTCGTTTGCCTTTTTTTACAAAACCAACGGCCAGAGCCAAAATTGAACTGA 1053 46.63 MGICISTASSQIRHETKVGAICTTNDLVFEEDYSFICGIQKLDSICSKQGSKGLNQDAAFFHQECGEQDTALFGVFDGHGKNGHIVSDIVKNRLPSLLLGQRNAMSKNETNLELERDSEDHFDVRDGEFVQSKNFVSWKEAVVTAFKVMDKEIKLQENLDCLYSGTTAVIALKQGEDLVIANLGDSRAVMGRMTEDGMKGIQLTTDLKPGLPNEAERIRKCNGRVLALKEEPHIQRVWLPNEDAPGLAMSRAFGDFALKNHGIIALPDVSYRRLTSDDHFILLATDGIWDVLSNNQVASIVCAAESEEAAAKAVVEAAAVAWKRYPASKLDDCTVVCLFLQNQRPEPKLN 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 112317390 112320371 + Tan0020530.1 Tan01g4645 742069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4645 350 SMART PP2C_4 30 338 IPR001932 -
Tan01g4645 350 CDD PP2Cc 44 340 IPR001932 -
Tan01g4645 350 ProSiteProfiles PPM-type phosphatase domain profile. 42 340 IPR001932 -
Tan01g4645 350 PANTHER PROTEIN PHOSPHATASE 44 339 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Tan01g4645 350 ProSitePatterns PPM-type phosphatase domain signature. 72 80 IPR000222 GO:0043169(InterPro)
Tan01g4645 350 Gene3D - 43 343 IPR036457 -
Tan01g4645 350 Pfam Protein phosphatase 2C 50 318 IPR001932 -
Tan01g4645 350 SUPERFAMILY PP2C-like 43 342 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4645 Tan-Chr1:112317390 Tan02g0240 Tan-Chr2:2098199 2.60E-77 dispersed
Tan01g4645 Tan-Chr1:112317390 Tan02g1435 Tan-Chr2:55688458 3.60E-79 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4645 - - - 0.0