Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g4663 | ATGACTATGGAAGTTACTTCTGAGTCTCAACAACATTCTCACTACCACAACCAAAACCAAGCAACTTCTAACACCATGTCAAATAGCTTCTTAGCTTCTCAGCACTATAATGGTGATTTGCTAATTTCTCCCTTGTCTGTTATGCCACTCAAGTCAGATGGATCTCTTTGCTTCATGGAGTCAATCAGCACATCACAACCTCAAGAAATATTGCCAAATATCTCACCAAAGCTTGAGGACTTTCTTGGTGGTGCAACTCATGGAAGAGAGGCCACAGCTTTGAGCTTAGACAGCATATATTACAATCAAAATGCTGAGGCTGATTCACAGAGACAACATTCACTAGATCTTTTTAAGCAACAAGAGCAACAGCATATTCTTTTTCAATCTCAGCGATACTATTCTGGAATGTTCCAGTTTCCAGCTGAGGATGCCAACAAGGAGTCTCATATTGCAAGCTATTGTTCTGAAATTCGACAAGCTATGGAGCAGCGTATCAATGGCTGCTATGGAGGGATGAATTCCCAAGACTTGCAGCCACTTAGCTTGTCAATGAGTCCTGGTTCTCAGTCTAGTTGCGTTACTGCTCCAAGCCAAATTTCTCATCCTGGATCAGCCAACATGGAAACAAAGAAAAGGGGTCTGCCTGGTCAAAAGCAGCCGGTCCATCGGAAGTCGATCGACACGTTCGGACAAAGAACTTCGCAGTACAGAGGTGTTACGAGACATAGATGGACTGGTAGATATGAGGCTCATTTGTGGGATAATAGTTGTAAGAAGGAAGGCCAAACCAGGAAAGGAAGACAAGTTTATCTCGGTGGTTATGATATGGAGGAGAAAGCAGCAAGAGCTTATGATCTTGCAGCTCTCAAGTACTGGGGACCCTCCACACATTTAAACTTCCCGTTAAAGAACTATCAAGTTGAAATCGAAGAAATGAAGAAGATGAACCGCCAAGAATATGTTGCGCACCTGAGAAGGAAAAGCAGTGGATTCTCCAGGGGAGCTTCAATATACAGAGGAGTAACTAGACATCATCAGCATGGGAGATGGCAAGCTCGGATCGGAAGAGTCGCCGGGAATAAAGACCTCTATCTTGGAACATTTGGCACACAAGAGGAAGCAGCTGAAGCCTATGACATAGCAGCCATCAAGTTCCGCGGTGCAAACGCCGTTACAAACTTCGACACTTCAAGGTATAATGTAGAACGGATCATGGCGAGCAGCAGCCTCCTTTCGGGAGAGTTTGCAAGACGAAACAAAGAGCACAAACCAACCAACATGATCGAGCACAAAGAACCGAAACAGAACATCGCTCAAATCGACCCCTCTGAGATATCCAACAGTAACAACTTAGATTGGAGGACAGCATTCCACGACACCCTGCTGCTGGATCCAAACGCAACCGTTGAATCCATAGATCAAAAGTCCATGACTTCCTGCGGTTACTTAAACCATCTGATTGGAGTCGAAACTGCAACAGTGAACGATTCGAGCAAGTTCAAGGCACATTTCTCCAATGCTTCCTCTGTGGTGAGCAGCCTGAGCAGCTCAAGGGAAACAAGTCCTGATAAGTCAAATGCCTCAGCCTCATCCTCAGTGTTATTAACAAAAGCAGCTCCATTTGGAAGCAGCAATGGAAGCATTTGGCTGCCATCAACCCAAATGAGGCCATCTCCTATTTCTTTGCCTGTTGTGTCAAGTGTTTGGAATGATGTCTGA | 1722 | 44.83 | MTMEVTSESQQHSHYHNQNQATSNTMSNSFLASQHYNGDLLISPLSVMPLKSDGSLCFMESISTSQPQEILPNISPKLEDFLGGATHGREATALSLDSIYYNQNAEADSQRQHSLDLFKQQEQQHILFQSQRYYSGMFQFPAEDANKESHIASYCSEIRQAMEQRINGCYGGMNSQDLQPLSLSMSPGSQSSCVTAPSQISHPGSANMETKKRGLPGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHLNFPLKNYQVEIEEMKKMNRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDIAAIKFRGANAVTNFDTSRYNVERIMASSSLLSGEFARRNKEHKPTNMIEHKEPKQNIAQIDPSEISNSNNLDWRTAFHDTLLLDPNATVESIDQKSMTSCGYLNHLIGVETATVNDSSKFKAHFSNASSVVSSLSSSRETSPDKSNASASSSVLLTKAAPFGSSNGSIWLPSTQMRPSPISLPVVSSVWNDV | 573 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 112615755 | 112618574 | - | Tan0017606.1 | Tan01g4663 | 742087 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g4663 | 573 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Tan01g4663 | 573 | PRINTS | Ethylene responsive element binding protein signature | 378 | 398 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan01g4663 | 573 | PRINTS | Ethylene responsive element binding protein signature | 237 | 248 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan01g4663 | 573 | ProSiteProfiles | AP2/ERF domain profile. | 338 | 396 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan01g4663 | 573 | MobiDBLite | consensus disorder prediction | 183 | 223 | - | - | |
Tan01g4663 | 573 | FunFam | AP2-like ethylene-responsive transcription factor | 337 | 398 | - | - | |
Tan01g4663 | 573 | MobiDBLite | consensus disorder prediction | 183 | 206 | - | - | |
Tan01g4663 | 573 | SUPERFAMILY | DNA-binding domain | 337 | 397 | IPR016177 | GO:0003677(InterPro) | |
Tan01g4663 | 573 | CDD | AP2 | 235 | 302 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan01g4663 | 573 | FunFam | AP2-like ethylene-responsive transcription factor ANT | 235 | 304 | - | - | |
Tan01g4663 | 573 | SUPERFAMILY | DNA-binding domain | 235 | 303 | IPR016177 | GO:0003677(InterPro) | |
Tan01g4663 | 573 | CDD | AP2 | 337 | 398 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan01g4663 | 573 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 129 | 446 | - | - | |
Tan01g4663 | 573 | Pfam | AP2 domain | 236 | 294 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan01g4663 | 573 | Pfam | AP2 domain | 339 | 388 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan01g4663 | 573 | Gene3D | AP2/ERF domain | 338 | 398 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan01g4663 | 573 | Gene3D | AP2/ERF domain | 235 | 304 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan01g4663 | 573 | ProSiteProfiles | AP2/ERF domain profile. | 236 | 302 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan01g4663 | 573 | SMART | rav1_2 | 338 | 402 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan01g4663 | 573 | SMART | rav1_2 | 236 | 308 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g4663 | Tan-Chr1:112615755 | Tan03g1702 | Tan-Chr3:72989291 | 7.10E-125 | dispersed | |
Tan01g4663 | Tan-Chr1:112615755 | Tan02g1691 | Tan-Chr2:79514328 | 1.10E-157 | wgd | |
Tan01g4663 | Tan-Chr1:112615755 | Tan03g1701 | Tan-Chr3:72988612 | 1.00E-139 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
26582 | PF00847 | AP2 | 1.30E-13 | CL0081 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g4663 | K09285 | - | csv:101212143 | 877.47 |