Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4679 ATGGCCACGATCCTCCGTGTCCCTGTTCTGTTGGTTGCTCTTTTTCAGGTGTTCTCTGCCGCCGCTGCCGGGTCTTACCGGACGGTGAAGTCTCTGCCGGGATTCTCAGGTCCTCTTCCTTTCGTACTGGAAACAGGATACGTAGGAGTGGGAAATTCTGAGGAATTCCAACTGTTTTATTATTTTGTCAAATCCGATGCAAATCCCCAAATGGATCCTCTCATTCTTTGGTTCACCGGAGGCCCTCGTTGCTCTGCTTTCTCTGGACTTGCCTTCGAAATTGGTCCAATAAGGTTTAAAGGAGAGGCCAAGAATGGAACCCTCCCTCAACTAATTTTGAACCCTTACTCGTGGACAAAGAAATCCAATATAATATTTCTAGACTTGCCCGTGGGTACTGGATTTTCATATGCTACCACCACCTCAGAAATTCCCAAGCAAGGAGATTTTAGTCAAATTCATCATGCTCTTCAATTCTTAAGAAAGTGGTTGGTTGATCATCCAAAATTTATATCAAATCCGTTCTATGTTGGTGGAGACTCCTACTCTGGTATGATTGTTCCAGTTGTTGCTCAAAAAATTTTAGAAGGAAATAAACATATTTCCCCATTTATAAATTTCCAGGGATACATATTGGGAAATCCTGTCACCACTCCTCATTCAAATAAAAATTTTGAAATCCCTTTTGCTCATAGTATGGCTCTCATTTCTAATGAATTGTTTGAGTCGTTGAAAACTAGTTGCCAAAAAGAATATGTGAATATTGATCCAAATAATGTGGAGTGCTTAAGACATTATGATACGTTCAAAAAGTGTACTTCAAAAGTTCGAGCTGGATTTATTTTAGGGCCGGCCCAATGCTCGTTTTCAATGCAACAAGATATACTTGCTCGTAGATTTCTCTATGGCATACATCTTAATCCTAAATGCCCTGAGTATGAATACTTACTTGCTTACTATTGGATTAACGACTACCAAGTTCGAAAAGCACTTCATATACAGGAAGGAAGCATTGGAGAATGGGTGAGATGCAAGGATAATGAATATTATGATTATGAGCTTACTAGTGTTTTTCCTTATCATGTGAACCTTAGTTCTAAAGGTTATCGATCGTTAATCTTTAGTGGAGATCATGATATGAAAGTGCCGCATATGGAAACCCTAGCATGGATCAAATCTTTAAATTATTCCATTGTCGATGATTGGAGACCGTGGTTCATTGAAGATGAAGTAGCTGGATTCACAAGAAGTTTTGCAAATAATATGACATTTGCAACTATAAAAGGTGGAGGGCATACGCCACAATACACACGAAAAGAATGCAGCGTACTATTTAAGAGGTGGATAGTAGGAGAATCCTTATAA 1365 39.27 MATILRVPVLLVALFQVFSAAAAGSYRTVKSLPGFSGPLPFVLETGYVGVGNSEEFQLFYYFVKSDANPQMDPLILWFTGGPRCSAFSGLAFEIGPIRFKGEAKNGTLPQLILNPYSWTKKSNIIFLDLPVGTGFSYATTTSEIPKQGDFSQIHHALQFLRKWLVDHPKFISNPFYVGGDSYSGMIVPVVAQKILEGNKHISPFINFQGYILGNPVTTPHSNKNFEIPFAHSMALISNELFESLKTSCQKEYVNIDPNNVECLRHYDTFKKCTSKVRAGFILGPAQCSFSMQQDILARRFLYGIHLNPKCPEYEYLLAYYWINDYQVRKALHIQEGSIGEWVRCKDNEYYDYELTSVFPYHVNLSSKGYRSLIFSGDHDMKVPHMETLAWIKSLNYSIVDDWRPWFIEDEVAGFTRSFANNMTFATIKGGGHTPQYTRKECSVLFKRWIVGESL 454
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 112773158 112777976 + Tan0014525.1 Tan01g4679 742103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4679 454 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 28 448 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)|GO:0016747(PANTHER)|GO:0019748(PANTHER)
Tan01g4679 454 Gene3D alpha/beta hydrolase 31 454 IPR029058 -
Tan01g4679 454 Pfam Serine carboxypeptidase 33 450 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Tan01g4679 454 FunFam Serine carboxypeptidase-like 11 23 454 - -
Tan01g4679 454 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Tan01g4679 454 PRINTS Carboxypeptidase C serine protease (S10) family signature 422 435 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Tan01g4679 454 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Tan01g4679 454 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185(InterPro)|GO:0006508(InterPro)
Tan01g4679 454 SUPERFAMILY alpha/beta-Hydrolases 28 451 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1939 Tan-Chr1:21148376 Tan01g4679 Tan-Chr1:112773158 1.60E-191 dispersed
Tan01g1940 Tan-Chr1:21199395 Tan01g4679 Tan-Chr1:112773158 9.80E-79 dispersed
Tan01g4679 Tan-Chr1:112773158 Tan06g1116 Tan-Chr6:10965912 2.20E-92 dispersed
Tan01g4676 Tan-Chr1:112733064 Tan01g4679 Tan-Chr1:112773158 2.70E-133 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4679 K16296 - csv:101207623 645.966