Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan01g4719 | ATGACAAAATCCCGGCTAGATCCCGCCGTCTCCGTCGCATCCCGACAAGACAATTCAAACGGTGCACGAAGAGTCAGTGGTAGTAGTGAAGCCATGGGAGTGTTGAGAGCTATATTTTTTTACATTCCACTGTTTTTAGTGTTGTATGTATTAACAGAGAAATTTCTTCACAAGATTAGAAACCTCCCGCCGTCCCCTTTCCCGTCGCTTCCAGTCATCGGCCATCTCCACCTCTTGAAGAAGCCCATCTACCGGACGTTGGCGGAGATCTCGAACCGGTACGGTCCAGTTGTGTTTCTCCACTTCGGGTTGCGGCCGGTTCTGGTGGTGTCGTCTCCTTCTGCGGCGGAAGAATGTCTGAGCAAGAACGACGTCGTGTTTGCAAACCGGCCTCGTCTCCTCATATCCAAGTGGTTCGGATACAACAACACGAACCTCGTGTGGTCGTCGTATGGGGACCACTGGCGAAACCTCCGCCGAATCTCCACCGTTGAAATCTTGTCAACCCAACGCCTTCAGATGCTCTCAGCCGTCCGTCTGGAAGAGGTCAAATCTCTGATTCAAAGGCTGGCGAAAGGTGAAAACCAAGTGCATGACATGAATACTGCGTTTTTCAATCTGACTTTTAACGTCATGTTGAGAATGATTGTCGGAAAGCGGTTTTACGGTGATGACGTGGATGATGCCGACGAGGCAAAAAGATTTAGGGAGTTACAGGCCAAGTCAACGCAATTGGGTGGTAAGCCCTATATAGGAGATTTTATCCCATTCGTATCGTGGTTGGGATTTGGGTTGACGGCGGAGAAGAATATAATGGAATGTCACAAAGGAAGAGACGCTTTCATGCAGAGTTTGATCAACCAGCAAAGGAAAATAACCATTGAAAGTACTGGAACTGATAATTTGTTTCGCGATGGAAGGAGGAAGACCATGGTTGAAGTACTCTTAGAGCTACAAGAATCTGAACCTGAGCAGTACAGTGACGAAACTATCAAAGCCTTGATGTTGGTTTTGTTGGCTGCAGGTACAGAAACTTCTGTGAACACAATGGAATGGGCCTTATCTCTGATGCTGAACCATCCAGAAGTTTTAAAGAAAGCTCAGGTCGAGATTGACGAGAAAGTTGGGCAGGACCGTCTGATAAACGAATCCGACGTGGAAAACCTTCCGTTTCTACGTGGCATCATAAACGAGACGTTACGAATGTACCCTCCAGCTCCATTAATGGTACCTCATGAATCATCGAAAGAGTGCAGTGTTGGGGGACATCATATCCCAGGTGGCACAATGTTATACGTCAATTTATGGGCCATTCATAACGACCCTAAGATTTGGGCTGACCCAAGAAAGTTTGACCCCGAAAGGTTTGAGAAGGTGGAAAGTGAAAAGTACGGGTTCAATCTGATGCCATTCGGGTCGGGTCGAAGGGGGTGTCCAGGAGAGGGATTGGGCCTTAGAATGATTGGGCTTGTATTGGGCTCTTTGATCCAGTGCTTTGAATGGGAGCGTCCTGGTGAGGAGTTGGTGGATATGACAGAAGGCATTGCAGTCTCTATGCCTAAGGCACAACGCTTGCTGGCTAAATGTAGGCCTCGACCTATAGTTGATCGCCTTGTTCTTTCTTAA | 1626 | 47.72 | MTKSRLDPAVSVASRQDNSNGARRVSGSSEAMGVLRAIFFYIPLFLVLYVLTEKFLHKIRNLPPSPFPSLPVIGHLHLLKKPIYRTLAEISNRYGPVVFLHFGLRPVLVVSSPSAAEECLSKNDVVFANRPRLLISKWFGYNNTNLVWSSYGDHWRNLRRISTVEILSTQRLQMLSAVRLEEVKSLIQRLAKGENQVHDMNTAFFNLTFNVMLRMIVGKRFYGDDVDDADEAKRFRELQAKSTQLGGKPYIGDFIPFVSWLGFGLTAEKNIMECHKGRDAFMQSLINQQRKITIESTGTDNLFRDGRRKTMVEVLLELQESEPEQYSDETIKALMLVLLAAGTETSVNTMEWALSLMLNHPEVLKKAQVEIDEKVGQDRLINESDVENLPFLRGIINETLRMYPPAPLMVPHESSKECSVGGHHIPGGTMLYVNLWAIHNDPKIWADPRKFDPERFEKVESEKYGFNLMPFGSGRRGCPGEGLGLRMIGLVLGSLIQCFEWERPGEELVDMTEGIAVSMPKAQRLLAKCRPRPIVDRLVLS | 541 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 113052083 | 113056756 | - | Tan0016076.1 | Tan01g4719 | 742143 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan01g4719 | 541 | FunFam | Cytochrome P450 family protein | 54 | 535 | - | - | |
| Tan01g4719 | 541 | SUPERFAMILY | Cytochrome P450 | 63 | 532 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4719 | 541 | PANTHER | CYTOCHROME P450 82C3-RELATED | 44 | 532 | IPR050651 | - | |
| Tan01g4719 | 541 | Pfam | Cytochrome P450 | 64 | 521 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4719 | 541 | PRINTS | P450 superfamily signature | 478 | 489 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4719 | 541 | PRINTS | P450 superfamily signature | 469 | 478 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4719 | 541 | PRINTS | P450 superfamily signature | 394 | 405 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4719 | 541 | PRINTS | P450 superfamily signature | 341 | 358 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4719 | 541 | Gene3D | Cytochrome P450 | 56 | 536 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4719 | 541 | PRINTS | E-class P450 group I signature | 468 | 478 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4719 | 541 | PRINTS | E-class P450 group I signature | 115 | 136 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4719 | 541 | PRINTS | E-class P450 group I signature | 91 | 110 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4719 | 541 | PRINTS | E-class P450 group I signature | 393 | 411 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4719 | 541 | PRINTS | E-class P450 group I signature | 350 | 376 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4719 | 541 | PRINTS | E-class P450 group I signature | 434 | 458 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4719 | 541 | PRINTS | E-class P450 group I signature | 330 | 347 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4719 | 541 | PRINTS | E-class P450 group I signature | 207 | 225 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4719 | 541 | PRINTS | E-class P450 group I signature | 478 | 501 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4719 | 541 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 471 | 480 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan01g4719 | 541 | CDD | CYP81 | 95 | 525 | - | - | |
| Tan01g4719 | 541 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan01g4719 | Tan-Chr1:113052083 | Tan03g1601 | Tan-Chr3:72245494 | 5.10E-141 | dispersed | |
| Tan01g4718 | Tan-Chr1:113047462 | Tan01g4719 | Tan-Chr1:113052083 | 2.50E-230 | tandem | |
| Tan01g4719 | Tan-Chr1:113052083 | Tan01g4720 | Tan-Chr1:113060078 | 3.30E-172 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan01g4719 | - | - | - | 0.0 |