Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4749 ATGAATAACACGAATTTCGTCTGTAATCCTATGGACACTCTGCCATTATTACCCTCTTCTCAATTGCTGTTTTCGAACAACGCCATCAATTTCAGGCACAGGGTCTCCTTTGCCGTAAAACCCACATTCCAGAGTTCGTGCAGATGGCGAATCCGAGCCACCGCCGAACACGGAGCTTCATCGGCGTCGACCTCCGAGATCGACATGGTGAGGAACAGAGAGGGGATTTTTACCGCCAAACAAAGCAAGGTCGTCGTGCTTTGGGATCTCGATAACAAACCCCCTCGTGGGCCGCCGTACGAGGCGGCTATGGCGCTGAAACGAGTGGCGCAACGCTTCGGGCAAGTGGTCGACATGTCGGCATACGCCAATCGTCACGCCTTTATCCATTTGCCGCAATGGGTTGTCGAAGAACGCCGCGAGCGTCGGCAATTGGATATTCTTGAGCGGAAAGGGTTGTTCACGCCGTCCGAGTCTTACGTCTGTGGTGTCTGCGGTCGTAAGTGCAAAACAAACCTAGACCTGAAGAAGCATTTCAAGCAACTTCACGAACGCGAGCGCCAGAAGAAATTGAACAGAATGAGGTCTCTCAAGGGCAAAAAGCGGCAGCGTTATCAGGAAAGGTTCATATCAGGGAACCATAAGTACAATGAAGCGGCGAGGTCTCTGATTACTCCGAAAGTTGGGTATGGGTTGGCCTCGGAATTGAGGCGTGCTGGGGTTTTTGTGAAGACGGTGGAGGATAAGCCACAGGCAGCTGATTGGGCTTTGAAGAGGCAGATGCAGCACTCTATGAGTCGTGGTATTGATTGGATGTTTCTAGTTTCGGATGATTCGGATTTCTCAGAGATGTTAAGGAAGGCCAAGGAGTCTAATTTGGGGACTGTGGTGGTGGGGGATCGTGATAGGGCATTGGGTAGGCACGCAGATTTATGGGTTCCATGGATGGGGGTGGAAAATGGGGATGTGACACAAGAGGATTTGGTGCCCAAAAGATGGAGGACGAGGAGAAGCGAGGAGGATTTGAATGAAGATGATGGTTTTTCAGTTTCTCGTTTTTATGGAGACATTGAAACTGGTAGTGATTTGGAGGGTGTAGTGGAAGAGCTTGCTTCCGCAAATACAGGGTTCAATGGCTTTAGAATTTCTGCATTTTCAGAGGGAGAAGAAGAAGAAGAAGAAGAATGGGTTGATGAGGATGTGACCTCTGACTATCAGCTAGTGATGAGTGACGAGGAAGATGAGTATTTCTGA 1254 49.52 MNNTNFVCNPMDTLPLLPSSQLLFSNNAINFRHRVSFAVKPTFQSSCRWRIRATAEHGASSASTSEIDMVRNREGIFTAKQSKVVVLWDLDNKPPRGPPYEAAMALKRVAQRFGQVVDMSAYANRHAFIHLPQWVVEERRERRQLDILERKGLFTPSESYVCGVCGRKCKTNLDLKKHFKQLHERERQKKLNRMRSLKGKKRQRYQERFISGNHKYNEAARSLITPKVGYGLASELRRAGVFVKTVEDKPQAADWALKRQMQHSMSRGIDWMFLVSDDSDFSEMLRKAKESNLGTVVVGDRDRALGRHADLWVPWMGVENGDVTQEDLVPKRWRTRRSEEDLNEDDGFSVSRFYGDIETGSDLEGVVEELASANTGFNGFRISAFSEGEEEEEEEWVDEDVTSDYQLVMSDEEDEYF 417
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 113311000 113313093 + Tan0016683.1 Tan01g4749 742173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4749 417 Gene3D - 77 316 - -
Tan01g4749 417 ProSiteProfiles Zinc finger C2H2 type domain profile. 160 188 IPR013087 -
Tan01g4749 417 MobiDBLite consensus disorder prediction 387 417 - -
Tan01g4749 417 ProSitePatterns Zinc finger C2H2 type domain signature. 162 183 IPR013087 -
Tan01g4749 417 PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN 50 396 - -
Tan01g4749 417 Coils Coil 180 200 - -
Tan01g4749 417 CDD PIN_LabA-like 170 300 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1989 Tan-Chr1:22162652 Tan01g4749 Tan-Chr1:113311000 3.70E-58 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26591 None None None None Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4749 - - - 0.0