Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g4766 | ATGGAAAATGATCATCTGAAATCGGAGGATCAGATGGAGATTATCATGATGATGCAACAAATGGACAAAATCCCAGAGTTTTGCAGTGCTTACAATGATCTCTCGCCCGCGTCTGATTTCAGCTCAAGCAGCAATAACATCAGCACCACAGACCCACATTGCCTCGAAAGCCTTCAACAAGCCGCAGAGTCATCGCCTCCATTATTCATGAACCTACCTCTGCCCCCAAGTGTTGAACAACCCTCGGTTTTGGCGGCAACAGCTCCATTCCCCAACGGTTCACGGTGGCGAAGTTCAATGCTTTCCAGTGGCGAAACAGACTCGCAGAAGCAGCGGTCGGTGGCAGCGATGAGGGAGATGATATTCCGAATGGCAGTGATGCAGCCAATTCACATAGACCCAGAATCAGTGAAGCCGCCAAAAAGAAGGAACGTGAAGATTTCAACAGACCCACAAAGCGTAGCGGCTCGGCATAGGAGAGAGAGAATAAGCGAGAGAATTAGGATACTTCAAAGACTGGTCCCTGGAGGTACAAAAATGGACACAGCTTCGATGTTGGACGAAGCCATACATTACGTAAAATTCTTAAAGACACAAGTGCAGTCGCTCGAACGAGCTGCGGCTAACAGACCAATCGGTAGCAGTGCCGGTACTGTAGCAGGTGGCGTAGGGTTTCCTTTGGAAATGTCAAGTGGGAGCTATGTTCCCATCGCTAAACCTTCCCCAATGCCTCACAACGTTGAGCAATTCGGAGATGCTTAA | 762 | 48.95 | MENDHLKSEDQMEIIMMMQQMDKIPEFCSAYNDLSPASDFSSSSNNISTTDPHCLESLQQAAESSPPLFMNLPLPPSVEQPSVLAATAPFPNGSRWRSSMLSSGETDSQKQRSVAAMREMIFRMAVMQPIHIDPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAANRPIGSSAGTVAGGVGFPLEMSSGSYVPIAKPSPMPHNVEQFGDA | 253 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 113495252 | 113496013 | + | Tan0012742.1 | Tan01g4766 | 742190 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g4766 | 253 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 147 | 196 | IPR011598 | GO:0046983(InterPro) | |
Tan01g4766 | 253 | FunFam | BHLH transcription factor | 150 | 212 | - | - | |
Tan01g4766 | 253 | MobiDBLite | consensus disorder prediction | 134 | 159 | - | - | |
Tan01g4766 | 253 | Gene3D | - | 150 | 211 | IPR036638 | GO:0046983(InterPro) | |
Tan01g4766 | 253 | PANTHER | TRANSCRIPTION FACTOR HEC3-RELATED | 36 | 218 | IPR045843 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan01g4766 | 253 | SMART | finulus | 153 | 202 | IPR011598 | GO:0046983(InterPro) | |
Tan01g4766 | 253 | Pfam | Helix-loop-helix DNA-binding domain | 156 | 197 | IPR011598 | GO:0046983(InterPro) | |
Tan01g4766 | 253 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 152 | 205 | IPR036638 | GO:0046983(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g4766 | Tan-Chr1:113495252 | Tan05g1685 | Tan-Chr5:49618688 | 6.50E-38 | dispersed | |
Tan03g0769 | Tan-Chr3:63654686 | Tan01g4766 | Tan-Chr1:113495252 | 5.40E-21 | transposed | |
Tan03g1315 | Tan-Chr3:69651855 | Tan01g4766 | Tan-Chr1:113495252 | 2.20E-35 | transposed | |
Tan01g4766 | Tan-Chr1:113495252 | Tan02g1808 | Tan-Chr2:83613506 | 7.60E-55 | wgd | |
Tan01g4766 | Tan-Chr1:113495252 | Tan03g1549 | Tan-Chr3:71794546 | 9.10E-08 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
26598 | PF00010 | HLH | 1.70E-06 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g4766 | - | - | - | 0.0 |