Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4795 ATGGGTGTAATTTTTCTATCTCTTTTGCTCTTTTTTCTCACTCTATTATCGTACATTTCTTTAAAGACAAACAAGAAGAGGGCAGCCATTAGAGATGGAGCTCAGCTCCCTCCTGGTTCTTTGGGTTGGCCTTATATTGGAGAAACCCTTCAACTCTATTCTCAAGACCCCGATTTTTTCTTTGCCGTCAAACAAAAAAGGTATGGGGAGATTTTTAAGACGCATATTCTTGGATGTCCTTGTGTGATGTTGGCTAGCCCTGAGGCGGCGAGGTTTGTGCTGATGACACAGGCTCATTTGTTTAAGCCTACTTACCCCAAAAGCAAAGAGCGTTTGATCGGCCCATCTGCCCTGTTTTTTCACCAAGGTGACTACCATTGCCGCCTCAGGAAGCTGGTTCAGAACTCTCTTTCTTTAGACGCCATCCGGAGCTTGGTGCCCGATATCGACTCCGCCGCTGCCTCCGCCATCGACTCTTGGGCTGGTGGCCACCTTGTTAACACCTTTCATGAAATGAAAAAGATATCCTTTGAAGTTGGGATATTGACCATTTTTGGGCATTTGGAAGCTGCTTACAAAGAGGACCTTAAAAAAAACTACAGCATTTTGGACGCTGGCTACAATTCTTTCCCCACCAACATTCCCGGAACTCCATACAAAAAGGCACTCTCAGCAAGAAAGCGGCTAAGTAAAACCTTAGGTGACATAATCCATGAGAGGAGGAAAAAAAAGGTGGCTGAGAAGGATCTATTGGGATGCCTTTTGAACTCCATAGATGAAGAAGGTGAAGTTATAAGCGATGCCCAAATAGCAGATAACATAATAGGAGTGCTTTTTGCGGCTCAAGACACCACAGCCAGTGTCATGACTTGGATTGTCAAGTACCTTCATGACCAACCCAAGCTTCTTCAAACCGTAAAGACTGAACAAGAGGAAATCCTAAAATTAAATTGTGAGAATGATCAGAGATTGAACTGGGTTCAGACACGAAACATGCCTATCAGTTATAAGGTGGTATTAGAGAGCTTGAGGATGGCGAGCATTATATCATTCACTTTCAGAGAGGCTGTAGCTGATGTGGAATATAAAGGATACTTGATTCCAAAAGGTTGGAAAGTGATGCCTTTGTTCCGAAACATCCATCACAGTCCAGAATATTTTGTCGATCCTCACAACTTCGACCCTTCCAGGTTTGAGGTTGCACCCAAACCCAATACGTTCATGCCATTTGGCAGTGGAGTTCATGCCTGCCCAGGAAATGAACTTGCCAAGCTGGAGATTTTGATCATGATTCATCATCTAGTCACCAATTTCAGGTGGGAATTGGTTGGTTCGCAAAACGGGGTTCAGCATAGTCCATTTCCCGTTCCCTTTCAAGGCCTTCCAGCAAGATTTTGGAAGATAGCCCACCAGAAGACCGTATACAACAATATGGACCCAAACTAA 1446 44.12 MGVIFLSLLLFFLTLLSYISLKTNKKRAAIRDGAQLPPGSLGWPYIGETLQLYSQDPDFFFAVKQKRYGEIFKTHILGCPCVMLASPEAARFVLMTQAHLFKPTYPKSKERLIGPSALFFHQGDYHCRLRKLVQNSLSLDAIRSLVPDIDSAAASAIDSWAGGHLVNTFHEMKKISFEVGILTIFGHLEAAYKEDLKKNYSILDAGYNSFPTNIPGTPYKKALSARKRLSKTLGDIIHERRKKKVAEKDLLGCLLNSIDEEGEVISDAQIADNIIGVLFAAQDTTASVMTWIVKYLHDQPKLLQTVKTEQEEILKLNCENDQRLNWVQTRNMPISYKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVMPLFRNIHHSPEYFVDPHNFDPSRFEVAPKPNTFMPFGSGVHACPGNELAKLEILIMIHHLVTNFRWELVGSQNGVQHSPFPVPFQGLPARFWKIAHQKTVYNNMDPN 481
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 113861907 113866814 + Tan0017015.1 Tan01g4795 742219
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4795 481 Gene3D Cytochrome P450 26 468 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4795 481 PRINTS P450 superfamily signature 408 417 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4795 481 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4795 481 PRINTS P450 superfamily signature 417 428 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4795 481 PRINTS P450 superfamily signature 280 297 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4795 481 Pfam Cytochrome P450 37 443 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4795 481 PANTHER CYTOCHROME P450 26 35 449 - GO:0004497(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
Tan01g4795 481 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 410 419 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Tan01g4795 481 CDD CYP90-like 65 464 - -
Tan01g4795 481 SUPERFAMILY Cytochrome P450 35 466 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4795 481 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4795 481 PRINTS E-class P450 group I signature 289 315 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4795 481 PRINTS E-class P450 group I signature 269 286 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4795 481 PRINTS E-class P450 group I signature 376 400 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4795 481 PRINTS E-class P450 group I signature 417 440 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4795 481 PRINTS E-class P450 group I signature 336 354 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4795 481 PRINTS E-class P450 group I signature 407 417 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4795 481 FunFam Abscisic acid 8 26 467 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2414 Tan-Chr1:29923666 Tan01g4795 Tan-Chr1:113861907 1.40E-150 dispersed
Tan01g4795 Tan-Chr1:113861907 Tan02g0908 Tan-Chr2:10378617 3.80E-188 dispersed
Tan02g0099 Tan-Chr2:1037743 Tan01g4795 Tan-Chr1:113861907 3.40E-64 transposed
Tan09g0669 Tan-Chr9:54959689 Tan01g4795 Tan-Chr1:113861907 3.30E-67 transposed
Tan01g4795 Tan-Chr1:113861907 Tan02g1829 Tan-Chr2:84360839 2.60E-189 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4795 K09843 - csv:101213916 842.802