Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4809 ATGTCCACGAGAAGTGAACATCATACAGTCCCGCTCTCTGTGCTCCTGAAGCGTGAATTGGCGATTGAGAAGATTGAGAGACCGGAAATCATACATGGTCAGGCGAGTCAGAGTAAGAAAGGGGAGGATTTTACATTGTTAAAGACGGAATGCGAGAGAGTGGTCGGAGATGGAGTCTCAACGTATTCGGTTTTTGGGCTTTTTGATGGACATAATGGATCTGCTGCTGCTATTTATTCCAAGGAGAATCTGTTGAACAATGTTTTAGCTGCTATTCCATCAGATCTCAACAGAGATGAATGGGTTGCAGCATTGCCAAGGGCCTTGGTTGCAGGTTTTGTGAAGACGGACAAAGATTTTCAAGAGAAAGCACAAACATCAGGAACCACCGTCACATTCATGATTATTGAGGGTTGGGTTGTCACTGTTGCTTCTGTTGGTGATTCCCGTTGCACTTTAGAATCAGCTGAAGGTGGCATCTACTACTTATCAGCAGATCATAGACTAGAATGCAATGAAGAAGAGAGAGAACGTATAATTGCCAGTGGTGGTGAGGTGGGCCGGCTGAATACTGGTGGTGGTGCAGAGATTGGTCCATTGAGATGCTGGCCCGGTGGCTTGTGTCTATCACGATCGATCGGTGATATGGATGTTGGTGAGTTTATAGTGCCTGTTCCCTATGTGAAGCAAGTTAAGCTATCTTCGACTGGTGGTAGGATTATTATTTCAAGTGATGGTGTTTGGGATGCTTTATCTGCTGAAACTGCCTATGATTGTAGTCGGGGGATGCCAGCAGAAACTGCTGCTGCACAGATTGTGAAGGAAGCAGTACAGTCAAAGGGACTTCGAGATGATACTACATGTATTGTGATTGACATATTACCAAGGGAGAAACTATCCACTGCTTTGCCGCCACCAAAGAAGCAGGGAAAAGGAATGTTTAAAGCAATGTTCCGCAAAAGATCTTCTGAATCGTCTTCTCATTTTGAGAAAGAATTTAATGAACCGGATGTTGTTGAAGAATTATTTGAGGAAGGATCGGCAATGCTGTCAGAAAGGTTTGTGCTTTAA 1071 44.16 MSTRSEHHTVPLSVLLKRELAIEKIERPEIIHGQASQSKKGEDFTLLKTECERVVGDGVSTYSVFGLFDGHNGSAAAIYSKENLLNNVLAAIPSDLNRDEWVAALPRALVAGFVKTDKDFQEKAQTSGTTVTFMIIEGWVVTVASVGDSRCTLESAEGGIYYLSADHRLECNEEERERIIASGGEVGRLNTGGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPVPYVKQVKLSSTGGRIIISSDGVWDALSAETAYDCSRGMPAETAAAQIVKEAVQSKGLRDDTTCIVIDILPREKLSTALPPPKKQGKGMFKAMFRKRSSESSSHFEKEFNEPDVVEELFEEGSAMLSERFVL 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 113964662 113969503 - Tan0010613.1 Tan01g4809 742233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4809 356 Gene3D - 32 301 IPR036457 -
Tan01g4809 356 ProSiteProfiles PPM-type phosphatase domain profile. 31 293 IPR001932 -
Tan01g4809 356 SMART PP2C_4 17 291 IPR001932 -
Tan01g4809 356 Pfam Protein phosphatase 2C 54 278 IPR001932 -
Tan01g4809 356 PANTHER PROTEIN PHOSPHATASE 32 292 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Tan01g4809 356 FunFam probable protein phosphatase 2C 12 32 299 - -
Tan01g4809 356 SUPERFAMILY PP2C-like 38 293 IPR036457 -
Tan01g4809 356 SMART PP2C_SIG_2 46 293 IPR001932 -
Tan01g4809 356 CDD PP2Cc 39 293 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4809 Tan-Chr1:113964662 Tan09g0121 Tan-Chr9:5771649 6.20E-119 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4809 - - - 0.0