Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g4848 | ATGGAAATCGACTATATTCGGAAAACGACCGCCGCCCGCGGCGGAAAAGCCGCTCAGCCACTGAACCGTCCGACCCCCACCGCTTCCTTCATTGCCCGCCGCCAGCTTCTAACCTTTCACAAGAGTTATGATTTGCCCGACGATTACGAGTCCAAAATCGTGGTCACTGAAACCTTTCCAAATCCCAGGCTCCGACGGGCTTTCATCGCCCTTCAAGCCTGGAAGAAGGCCATTTATTCCGACCCTTTCAACACCACCGCCAATTGGGTCGGCGCCGATGTCTGTTCCTACACCGGAGTTTTCTGCGCCCCTGCTCTCGACGACTCCAAAATCGAAGTCGTCGCCGGAATTGACATCAACCACGCCGACATCGCCGGTTACCTGCCCGTGGAGCTCGGTCTACTGACCGACATTGCGTTGTTTCACATCAACACCAACCGATTCTGCGGCATTATCCCCTCAAGCTTCGAGAGGCTGATTCTGCTTCACGAGCTGGACGTTAGCAACAACAGATTCGTGGGCCCTTTCCCTGAAGTCGTTGTGAAGATTCCAAATTTGAAATTTCTCGATATCAGATACAATGATTTCGAAGGCGAATTGCCTCCTGCGCTTTTCACTAAGGAACTCGATGCCATTTTCCTCAACAACAACAGATTCACCTCCTTCATTCCGGAGAATTTCGGCGACTCGCCGGCGTCGGTGATCGTGATTGCCAACAACAATTTCACAGGATGCATTCCGAGCAGCATTGGGAAAATGGGGAACACGTTGAACCAGGTTATAATGTTGAACAATGAATTTGTGGGTTGTTTGCCTGGTGAAATTGGGATGCTTGGAAATGCGACCGTTTTCGATGTTTCTTCCAATCAATTGAGTGGGATCTTGCCGAAGACCTTCGATGGGTTGAAGAAGGTCGAGATTATGGATATTTCTTCCAATTTTTTGACTGGTGTCGTGCAGGATGGTTTGTGTAATTTGCCCAAATTGGCTGATTTCACATTCTCTAACAATTTCTTCAATGGCGAGGCTGATAGGTGCGTCCCGCAGAATAGAAAAGATATTTTCTTGGATGACGGTAACAATTGCTTGCCGGAGAGACCCAAGCAGAAGGCGGCCGAGACTTGTAGTCCGGTGATCAGCAAGGCCGTTGATTGCAGTAAGGCTAAGTGCGGCGGAGGGTCTTCATCTTCGTCGCCGTCGCCGTCGCCGTCGAAGCCGCAGCCACCTAAGCATGACATTTCTGTACCAGAGACACCCAAATCAACGCCTGAAGCACCAAAATCGCCACCAGTTCCTGAGACGGGGACACGAAAATCATCACCGCCAGTTCCTGAAACAGACGCACCAAAATCATCGCCGCCAGTCCCTGAGACTGAAGCACCAAAATCATCATCGCCAGTTCCAGAGCCTGAGGCACCAAATTCGTCACCAGTGCCGGAGCCTGAAAGCCCAAATGCTCCACCTCCACCCATCGATGATCCTCATGATCAATCACCGGTTCCAAGATACCGTCCTCCTCCTCCACCTGCAGTGCACTCACCCCCAACACCGGTTTCATCTCCCCCACCACCGGTTTCATCTCCTCCACCGCCGGTCCACTTTCCCCCACCACCAGTTTCTTCACCACCACCACCAGTCCACTCTCCACCACCACCGGTTTCCTCACCCCCACCACCGGTTTCCTCACCCCCACCACCGGTTTCCTCACCCCCACCACCAGTCCACTCTCCACCACCACCCGTTTCCTCACCTCCACCACCAGTCCACTCTCCACCACCACCGGTGTCCTCACCTCCACCGCCAGTCTACTCACCTCCACCGCCGGTCTACTCTCCACCACCACCGGTTTACTCTCCACCACCACCCGTTGCATCACCCCCACCACCGGTTTACTCTCCACCACCACCGGTTGCCTCACCCCCACCACCAGTTTTCTCGCCACCACCACCGGTTTACTCTCCGCCACCACCACCGGTCTACTCTCCACCACCACCAGTGCACTCGCCTCCTCCTCCAGTCTATTCACCACCGCCTCCAGTCCAGTCTCCACCACCTCCGGTATTCTCTCCGCCGCCACCTTCCCCATCTCCCTCTCCTCCTCCTCCGGTCGCCTCTCCGCCGCCACCACTAGAGGAAATCATTCTTCCACCAAACTTGGGCTTCCAGTACTCATCACCGCCTCCACCAATGTTCCCCGGCTACTAA | 2205 | 54.47 | MEIDYIRKTTAARGGKAAQPLNRPTPTASFIARRQLLTFHKSYDLPDDYESKIVVTETFPNPRLRRAFIALQAWKKAIYSDPFNTTANWVGADVCSYTGVFCAPALDDSKIEVVAGIDINHADIAGYLPVELGLLTDIALFHINTNRFCGIIPSSFERLILLHELDVSNNRFVGPFPEVVVKIPNLKFLDIRYNDFEGELPPALFTKELDAIFLNNNRFTSFIPENFGDSPASVIVIANNNFTGCIPSSIGKMGNTLNQVIMLNNEFVGCLPGEIGMLGNATVFDVSSNQLSGILPKTFDGLKKVEIMDISSNFLTGVVQDGLCNLPKLADFTFSNNFFNGEADRCVPQNRKDIFLDDGNNCLPERPKQKAAETCSPVISKAVDCSKAKCGGGSSSSSPSPSPSKPQPPKHDISVPETPKSTPEAPKSPPVPETGTRKSSPPVPETDAPKSSPPVPETEAPKSSSPVPEPEAPNSSPVPEPESPNAPPPPIDDPHDQSPVPRYRPPPPPAVHSPPTPVSSPPPPVSSPPPPVHFPPPPVSSPPPPVHSPPPPVSSPPPPVSSPPPPVSSPPPPVHSPPPPVSSPPPPVHSPPPPVSSPPPPVYSPPPPVYSPPPPVYSPPPPVASPPPPVYSPPPPVASPPPPVFSPPPPVYSPPPPPVYSPPPPVHSPPPPVYSPPPPVQSPPPPVFSPPPPSPSPSPPPPVASPPPPLEEIILPPNLGFQYSSPPPPMFPGY | 734 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 114211412 | 114213831 | - | Tan0010205.1 | Tan01g4848 | 742272 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g4848 | 734 | MobiDBLite | consensus disorder prediction | 664 | 734 | - | - | |
Tan01g4848 | 734 | SUPERFAMILY | L domain-like | 69 | 357 | - | - | |
Tan01g4848 | 734 | MobiDBLite | consensus disorder prediction | 387 | 648 | - | - | |
Tan01g4848 | 734 | MobiDBLite | consensus disorder prediction | 664 | 714 | - | - | |
Tan01g4848 | 734 | PRINTS | Pistil-specific extensin-like signature | 581 | 599 | IPR003882 | - | |
Tan01g4848 | 734 | PRINTS | Pistil-specific extensin-like signature | 547 | 570 | IPR003882 | - | |
Tan01g4848 | 734 | PRINTS | Pistil-specific extensin-like signature | 695 | 716 | IPR003882 | - | |
Tan01g4848 | 734 | Pfam | Leucine Rich Repeat | 185 | 204 | IPR001611 | GO:0005515(InterPro) | |
Tan01g4848 | 734 | Gene3D | Ribonuclease Inhibitor | 68 | 363 | IPR032675 | - | |
Tan01g4848 | 734 | MobiDBLite | consensus disorder prediction | 446 | 648 | - | - | |
Tan01g4848 | 734 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 27 | 645 | IPR051582 | - | |
Tan01g4848 | 734 | FunFam | Leucine-rich repeat extensin-like protein 1 | 68 | 229 | - | - | |
Tan01g4848 | 734 | Pfam | Leucine rich repeat | 282 | 337 | IPR001611 | GO:0005515(InterPro) | |
Tan01g4848 | 734 | Pfam | Leucine rich repeat N-terminal domain | 70 | 102 | IPR013210 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g4848 | Tan-Chr1:114211412 | Tan06g2003 | Tan-Chr6:64911250 | 6.40E-54 | dispersed | |
Tan01g4848 | Tan-Chr1:114211412 | Tan09g1311 | Tan-Chr9:65422738 | 1.40E-40 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g4848 | - | - | - | 0.0 |