Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan01g4857 | ATGAAATTTCCCAAAACAATATCCATGGAAATCATTTCATCAAATCTCAATAATAGTTCCATAGTTGGACTCTTCTTCTTGCTTCTCTTCTCTTTTTTCATTTTGAAGAAGGCCAGAGCATATAAACGCAGAGACCCACCTGAGGCAGCCGGCGGATGGCCGATCATCGGCCACCTACGAAAGCTCGTAGGTCCAAAACTTCTCCACGAAACCTTGGGAGCCATGGCCGACAAATATGGCCCAATATTCACCATCCGAGTTGGAGTTCACAAAACCCTCGTTATAAGCAGTTGGGAAGTAGCAAAAGAGTGTTACACAACTCTTGATTCAGTCGTTTCTTCGCGTCCCAAAAGTATACGAGGAAAATTGTTGGGCTACAACTTTGCCGATTTTGGGTTCAGGCCAAATTATGATTCCTTTTACCGCAGTGTGCGTAAAATCATAGCCTCCGAACTGCTGTCGAATCGCCGATTGGAGTTACAGAGAGATGTTAGAGTTTCTGAGGTGAAGAAATCGGTGAAGGAGCTTTACAATTTGTGGAGAAAGAGAGATGTTAGAGACTCAGATGATTGGATGGTTCTTGATATGGATGAGTGGATTGGGAATATTAATTTGAATGTGATTTTGAAGATGGTTTGTGGGAAGAGGGTTTTTGGTGATGAAGAAATGAGACGGTGTCGCAAGTCTATGAGGGATTTTTTTGATTTGGGGGGCCAATTTATTGTGGCAGATGCGATTCCTTTTCTGGGATGGCTGGATTTGGGTGGATATGAGAAGGCCATGAAGAAAACTTCCAGGGAATTGGACTCTCTTATTGAGGAATGGCTTGAAGAACACCGCCGGAAGAGAGACTCCGGCGCTGCCGGTGGTGAACATGACTTCATGGATGTGATGCTTTCCGTTCTTGAAGAAGAAGGGATGGACCTTGCTGGCTATGATGCTGATACAGTCAACAAAGCCACTTGCATGTCCCTTATTGTTGGAGGAACCGATACAATGACAGTAACTCTAACATGGGCAATCTCGTTGTTGCTGAACAATCGAGAGGCACTGAGAAGAGCACAAGAGGAAGTAGACATCCAAGTCGGAAACAAAAGGGTTGTGGATGAATTAGACATAAGCCAACTGGCGTATCTTCAAGCCGTTGTGAAAGAGACATTAAGGTTGTATCCAACAGGCCCACTGTCGGGGATTCGAGAGTTCAATCAAGACTGTACGGTCAAAGGCTATAATGTGGCCGCCGGCACACGACTCGTCACTAACCTTTGGAAGATACAGACAGACCCTCGGGTTTGGCCCGACGAGCCTTTGGAGTTCAAACCTGAGAGGTTTCTGAGTAGCCACAACCACAAGCACTTGGATTTTAAAGGTCAGAATTTTGAACTTTCCCCGTTTGGTTATGGAAGAAGAGCTTGTCCTGGGATGGGGATCAGCCTTCAAATGACATTGTTGGTGCTGGCCAGTTTGATTCATTCTTTGGAACTTAGAACTCGGGCTGATGAACCGGTGGACATGGCTGCCAACCTTGGACTCACCATGCATAGAGTCAACCCTCTTCAAGTTCTTGTCAAGCCTCGCCTCCTACCAAGTGCTTATGCATGA | 1602 | 45.69 | MKFPKTISMEIISSNLNNSSIVGLFFLLLFSFFILKKARAYKRRDPPEAAGGWPIIGHLRKLVGPKLLHETLGAMADKYGPIFTIRVGVHKTLVISSWEVAKECYTTLDSVVSSRPKSIRGKLLGYNFADFGFRPNYDSFYRSVRKIIASELLSNRRLELQRDVRVSEVKKSVKELYNLWRKRDVRDSDDWMVLDMDEWIGNINLNVILKMVCGKRVFGDEEMRRCRKSMRDFFDLGGQFIVADAIPFLGWLDLGGYEKAMKKTSRELDSLIEEWLEEHRRKRDSGAAGGEHDFMDVMLSVLEEEGMDLAGYDADTVNKATCMSLIVGGTDTMTVTLTWAISLLLNNREALRRAQEEVDIQVGNKRVVDELDISQLAYLQAVVKETLRLYPTGPLSGIREFNQDCTVKGYNVAAGTRLVTNLWKIQTDPRVWPDEPLEFKPERFLSSHNHKHLDFKGQNFELSPFGYGRRACPGMGISLQMTLLVLASLIHSLELRTRADEPVDMAANLGLTMHRVNPLQVLVKPRLLPSAYA | 533 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 114288146 | 114292689 | + | Tan0010825.1 | Tan01g4857 | 742281 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan01g4857 | 533 | PANTHER | CYTOCHROME P450 82C3-RELATED | 25 | 527 | IPR050651 | - | |
| Tan01g4857 | 533 | FunFam | Cytochrome P450 82C4 | 36 | 524 | - | - | |
| Tan01g4857 | 533 | PRINTS | P450 superfamily signature | 328 | 345 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4857 | 533 | PRINTS | P450 superfamily signature | 463 | 472 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4857 | 533 | PRINTS | P450 superfamily signature | 381 | 392 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4857 | 533 | Coils | Coil | 254 | 274 | - | - | |
| Tan01g4857 | 533 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 465 | 474 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan01g4857 | 533 | Pfam | Cytochrome P450 | 51 | 515 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4857 | 533 | SUPERFAMILY | Cytochrome P450 | 52 | 526 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4857 | 533 | Gene3D | Cytochrome P450 | 35 | 528 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4857 | 533 | PRINTS | E-class P450 group I signature | 462 | 472 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4857 | 533 | PRINTS | E-class P450 group I signature | 380 | 398 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4857 | 533 | PRINTS | E-class P450 group I signature | 472 | 495 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4857 | 533 | PRINTS | E-class P450 group I signature | 203 | 221 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4857 | 533 | PRINTS | E-class P450 group I signature | 422 | 446 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4857 | 533 | PRINTS | E-class P450 group I signature | 317 | 334 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4857 | 533 | PRINTS | E-class P450 group I signature | 337 | 363 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4857 | 533 | PRINTS | E-class P450 group I signature | 76 | 95 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4857 | 533 | CDD | CYP82 | 80 | 526 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan01g4857 | Tan-Chr1:114288146 | Tan01g4867 | Tan-Chr1:114561450 | 2.60E-137 | dispersed | |
| Tan01g4856 | Tan-Chr1:114274949 | Tan01g4857 | Tan-Chr1:114288146 | 3.30E-209 | tandem | |
| Tan01g4857 | Tan-Chr1:114288146 | Tan01g4858 | Tan-Chr1:114348054 | 2.80E-123 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan01g4857 | - | - | - | 0.0 |