Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4867 ATGGAATTTCCTCACATCGTAGCTGCAAACTTCGCCCTTCTCTTATTTTTGTATGCTGTCTTCACTTTGTCCCGAAGATTTGGAACTCATGGGAAGAAGAGACATCCACCGGAAGCCGGCGGTGGTTGGCCAGTGATTGGCCACCTCCATAAACTAATTGCAAAAGAGCCAACGCACATAACCTTGGCCAAAATGGCGGACGCCTACGGACCAATCTTTACCTTAAGATTGGGTATGAACAAAGCCTTGATTGTGAGTAGTTGGGAAATAGCGAGAGAGTGTTTTACCACAAACGACAGAATCTTTGCCTCTCGCCCAAAACTTGCAGCCTCAGAGCTGCTCGGTTACAACTATGCCGCGTTGGGGGTGAGCCAATACGGTCCATACTGGCGCCATGTCCGCAAAATAGCCACGCTTGAACTTCTCACGAACCACCGACTGGAGCAGCTCCAACACATTAGAATATCAGAGGTTCAGAGTTGGATTAAGAAGCTATATGAGTTATGTGTCAACGACAGAAACAAAGGAGGAAGTGGGAAAGTGTCGGTGGAGATGAAGACGTGGTTTGGAGACCTAACACTGAATACAATTTTCAGAATGGTGGTTGGGAAGCGATTCTCGACTGCTTTTGATGGAAGTAATGGGGAGCAATATCGAAAGGAGTTGAGGAATTTTCTTGAACTGTTTGGGGCATTTGTTCCTTCTGATTCATTTCCATTTTTGAGTTGGTTGGATTTGGGAGGGTATAAGAAGGCCATGAAGAAGACGGCGAAGGTGTTGGACGAGATGCTTGATAAATGGATCAAAGAACACCGGGAGAAGAAGAATTCGGGTGAAATGGAGAGTACAAAAGAACAAGACTTTATGGATGTGATGCTTTCTACTGTACAAGACGATTCAGAATTATCTGGTTTTGATGTCGAGACTGTCACCAAAGCCACTTGTTTGACGATGATATTAGGTGGAGCTGATACTACAACAATAACTATGACATGGGCTCTTTCTCTACTCCTCAACCATCAAGAAGCACTCAAGAAGGCCCAAGTTGAATTAGACGAAAAAGTTGGAAGAGAAAGACAAGTGAAAGAATCTGATATAAAGAATTTAATATATCTCCAAGCCATTGTGAAGGAGACATTGCGTTTATATCCTGCAGTACCGTTGTTACTCCCTCATGAATCCATGGAAGATTGCACAGTTTCTGGCTACCACATCCCTGCAGGAACACGTCTAATTGTGAATGCTCAAAAGCTCCAAAAGAGTCCACTCGTCTGGGAGAATCCTTGTGAATTTCAGCCAGAAAGATTTTTAACGAGCCAAAAAAAGTTCGATATGAGAGGACAAAATTTTGAACTAATACCATTTGGAAGTGGTCGAAGAATATGCGCTGGAATCTCATTTGCCCTCCAAGTTATGCATCTTACGCTTGCCAATCTGCTTAATGGATTTGAAATTAGTAGGCCATCTGAAGAATTACTCGACATGGAAGAGAGTTCTGGGGTGACTAGTCTCAAGAAAACTCCACTTGAAGTTGTTTTAACTCCACGCCTACCAACTCAAGTTTATGAATGA 1572 43.32 MEFPHIVAANFALLLFLYAVFTLSRRFGTHGKKRHPPEAGGGWPVIGHLHKLIAKEPTHITLAKMADAYGPIFTLRLGMNKALIVSSWEIARECFTTNDRIFASRPKLAASELLGYNYAALGVSQYGPYWRHVRKIATLELLTNHRLEQLQHIRISEVQSWIKKLYELCVNDRNKGGSGKVSVEMKTWFGDLTLNTIFRMVVGKRFSTAFDGSNGEQYRKELRNFLELFGAFVPSDSFPFLSWLDLGGYKKAMKKTAKVLDEMLDKWIKEHREKKNSGEMESTKEQDFMDVMLSTVQDDSELSGFDVETVTKATCLTMILGGADTTTITMTWALSLLLNHQEALKKAQVELDEKVGRERQVKESDIKNLIYLQAIVKETLRLYPAVPLLLPHESMEDCTVSGYHIPAGTRLIVNAQKLQKSPLVWENPCEFQPERFLTSQKKFDMRGQNFELIPFGSGRRICAGISFALQVMHLTLANLLNGFEISRPSEELLDMEESSGVTSLKKTPLEVVLTPRLPTQVYE 523
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 114561450 114575189 + Tan0001870.1 Tan01g4867 742291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4867 523 SUPERFAMILY Cytochrome P450 42 516 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4867 523 PANTHER CYTOCHROME P450 82C3-RELATED 12 519 IPR050651 -
Tan01g4867 523 Gene3D Cytochrome P450 24 513 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4867 523 CDD CYP82 70 516 - -
Tan01g4867 523 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4867 523 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4867 523 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4867 523 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4867 523 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4867 523 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4867 523 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4867 523 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4867 523 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4867 523 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4867 523 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4867 523 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4867 523 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4867 523 FunFam Cytochrome P450 82C4 26 514 - -
Tan01g4867 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Tan01g4867 523 Pfam Cytochrome P450 40 506 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4857 Tan-Chr1:114288146 Tan01g4867 Tan-Chr1:114561450 2.60E-137 dispersed
Tan01g4859 Tan-Chr1:114357193 Tan01g4867 Tan-Chr1:114561450 1.20E-129 dispersed
Tan01g4864 Tan-Chr1:114476398 Tan01g4867 Tan-Chr1:114561450 2.20E-202 dispersed
Tan01g4865 Tan-Chr1:114519565 Tan01g4867 Tan-Chr1:114561450 1.00E-226 dispersed
Tan01g4867 Tan-Chr1:114561450 Tan01g4869 Tan-Chr1:114614070 1.00E-210 dispersed
Tan01g4873 Tan-Chr1:114717399 Tan01g4867 Tan-Chr1:114561450 1.10E-53 dispersed
Tan01g4866 Tan-Chr1:114548264 Tan01g4867 Tan-Chr1:114561450 4.00E-215 tandem
Tan01g4867 Tan-Chr1:114561450 Tan01g4868 Tan-Chr1:114598227 1.10E-209 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4867 - - - 0.0