Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4874 ATGTTCCCAAAAGCCTTCACGTTCAGTAAAGACATTCGGGACTTGGCTTCTGAAATGTTCCCAGGCCAAGTCGAAGCTGCTTTGAAGGAACCTCCCGGTGCTAAAACGGCACCGGAAAAGGTTCTTGTCGCCGTCAAGGCTGAGAGAGTGATTTCCAAATCTGCACTGGCTTGGGCTCTCACTCATGTTGTTCGTCCTGGAGACTGTATAACACTACTCGCCGTCTTCTCCGTCGAGAAAACTGGTAGAAGGTTCTGGAATTTTCACAGATGGAGCGGGGATTGTGCGAATGCTGTTGAGGAGAATCTGCCGGATCGAGTACACGAGATCTCCGAGTCTTGTTCTCAGATGGTGCTTCATTTCCACAATCAAGTCGAGGTTCAAGTGAGGATTAAAGTGGTCACAGGAACACAAGGAGGAGCTGTCGCTGCCGAAGCAAAGTTAAAAGGAGTTAACTGGGTCGTACTAGACAGGAAATTGAAGAATGAGGTGAAGAATTGCCTGGAAGAACTAAGCTGCAATATTGTTACAGTGAAAGGGTCTCAACCAAAAGTTCTCAGGCTTAATTTGGAGTGCTGGAGTGAACCTCAAACTCCTTTCTTTTCTGCTAATTCTTCTCCTGTTCGAAAAGGTCAACAAAATAGGATGAAGCAGACAACTCCACTACCAAGCAGACCAGAAGAAGAACCTGGTGCCTCATTCAGAAAATCCTCAAAAGAAGGATCAAAATTGGGTACTGATGCAGTGTCTTCTATTTTCCTTGTATATGAGCAAAACCCTCTATATGAAGGAAACTTAAAAGGAAACTACTTGCCAATTAATGAGAATAACGATTTAAGCATTTCAGTGTCTTCATCCAACTCATTGGAAGAAAAAGTTCTCTCTCTACCAAGGGCTCCTCCAACATCTGTTGCTTCAAATAAAAAATGTGTCTATTGGATTTCTCAGAACCATAACATTTCTGAAGGAAAAAAACTATCCAAGTCCAAAAGAAGATTCCTTAGATTTGCTTCAACTCCCAAGGTGCCATTCAGTAATCCTACAAATCTCGAGAAGAGTACGACTTTTGAAGATATTAGGCTCAACCAGTCTGAGAGAAAAGACTACATTGTGGACTCAAATATCAGGGATGCTGTCTCTTTGGGCAGAGCATCCTCTGCACCTCCTCCTCTGTGCTCAATATGTCAGCACAAGGCGCCGGCTTTTGGAAAACCTCCCAGACAGTTCTCCCTCAAAGAGCTCGAGGAAGCTACAGACGGATTTTCTGATATGAACTTCTTGGCAGAAGGCGGTTTTGGAATTGTTCATAGAGGAATCCTGAGAGATGGTCAGGTTGTAGCTGTGAAGCAGTTGAAATGTGGAGGCTTACAAGCAGATGCTGATTTTTGTAGGGAAGTTAGGGTGTTGAGTTGTGCACAACACAGAAATGTAGTGTTGCTGATTGGGTTTTGCATCGAGGACACGATGAGGTTATTAGTTTATGAGTACATATGCAATGGTTCATTGGATTTCCATTTACATGGAAATGGAAGCCAGTTAGATTGGCATTCAAGGTTAAAGATTGCAGTAGGAGCAGCGCGAGGTTTACGTTATCTTCATGAAGATTGCAGAGTGGGATGTATAGTGCATAGAGATATGCGACCTCACAATATCCTTCTAACACATGATTTTGAACCCATGGTTGCTGATTTCGGGTTGGCGAGGTGGCATTCTAAATGGTCAACCAGTATTGAGGAGCAAGTCATTGGAACTTCAGGGTATCTGGCACCAGAGTACATCAATGGTGGTATGGTATCACATAAAGTGGATGTATATGCATTTGGCATGGTTTTATTAGAGTTGATTAGTGGTAGAAGAAGCTGTGAGCTGCACCGTCTAGAGGGAAAACAATTCATATCAGAATGGTTCCATCCCATCTCTGCGTTGCAAATTCAACATTTACTAGCTAGTAGTAATCATTTAGTTGATCCATTCCTGGTCTCCGAGCAATCCCCCGACTTCTGTTATCAACTACATTCAATGGTCCGGGCCGCTTCCTTGTGTCTATGTCCAGATCCTGAATCAAGACCCTCGATGTCGAAGATTCTTCGAGTACTAGAAGGAGGAGATGCAGTTGTTCCTCTTGGTTTAGATTTCGACCCGGTTGGCTGCAGAAGTGCACACTTGGATGGTCTGACGGCTCACAAACAAATCGAAGCAAGAAGAAGCCATACTCGCACACTCTCACAATGA 2232 43.82 MFPKAFTFSKDIRDLASEMFPGQVEAALKEPPGAKTAPEKVLVAVKAERVISKSALAWALTHVVRPGDCITLLAVFSVEKTGRRFWNFHRWSGDCANAVEENLPDRVHEISESCSQMVLHFHNQVEVQVRIKVVTGTQGGAVAAEAKLKGVNWVVLDRKLKNEVKNCLEELSCNIVTVKGSQPKVLRLNLECWSEPQTPFFSANSSPVRKGQQNRMKQTTPLPSRPEEEPGASFRKSSKEGSKLGTDAVSSIFLVYEQNPLYEGNLKGNYLPINENNDLSISVSSSNSLEEKVLSLPRAPPTSVASNKKCVYWISQNHNISEGKKLSKSKRRFLRFASTPKVPFSNPTNLEKSTTFEDIRLNQSERKDYIVDSNIRDAVSLGRASSAPPPLCSICQHKAPAFGKPPRQFSLKELEEATDGFSDMNFLAEGGFGIVHRGILRDGQVVAVKQLKCGGLQADADFCREVRVLSCAQHRNVVLLIGFCIEDTMRLLVYEYICNGSLDFHLHGNGSQLDWHSRLKIAVGAARGLRYLHEDCRVGCIVHRDMRPHNILLTHDFEPMVADFGLARWHSKWSTSIEEQVIGTSGYLAPEYINGGMVSHKVDVYAFGMVLLELISGRRSCELHRLEGKQFISEWFHPISALQIQHLLASSNHLVDPFLVSEQSPDFCYQLHSMVRAASLCLCPDPESRPSMSKILRVLEGGDAVVPLGLDFDPVGCRSAHLDGLTAHKQIEARRSHTRTLSQ 743
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 114737251 114742735 + Tan0003363.1 Tan01g4874 742298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4874 743 MobiDBLite consensus disorder prediction 203 221 - -
Tan01g4874 743 Gene3D HUPs 38 179 IPR014729 -
Tan01g4874 743 Gene3D Phosphorylase Kinase; domain 1 392 496 - -
Tan01g4874 743 PANTHER OS01G0750732 PROTEIN 285 702 IPR050885 -
Tan01g4874 743 Pfam Protein kinase domain 425 697 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4874 743 SUPERFAMILY Protein kinase-like (PK-like) 403 699 IPR011009 -
Tan01g4874 743 Gene3D Transferase(Phosphotransferase) domain 1 497 705 - -
Tan01g4874 743 FunFam Os07g0541700 protein 497 584 - -
Tan01g4874 743 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 39 180 - -
Tan01g4874 743 ProSiteProfiles Protein kinase domain profile. 421 706 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4874 743 MobiDBLite consensus disorder prediction 203 243 - -
Tan01g4874 743 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 393 496 - -
Tan01g4874 743 ProSitePatterns Tyrosine protein kinases specific active-site signature. 541 553 IPR008266 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4874 Tan-Chr1:114737251 Tan04g2747 Tan-Chr4:86910117 6.10E-161 dispersed
Tan01g4874 Tan-Chr1:114737251 Tan01g4875 Tan-Chr1:114737251 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67148 PF00069 Pkinase 3.90E-41 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4874 - - - 0.0