Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4875 ATGGTGCTTCATTTCCACAATCAAGTCGAGGTTCAAGTGAGGATTAAAGTGGTCACAGGAACACAAGGAGGAGCTGTCGCTGCCGAAGCAAAGTTAAAAGGAGTTAACTGGGTCGTACTAGACAGGAAATTGAAGAATGAGGTGAAGAATTGCCTGGAAGAACTAAGCTGCAATATTGTTACAGTGAAAGGGTCTCAACCAAAAGTTCTCAGGCTTAATTTGGAGTGCTGGAGTGAACCTCAAACTCCTTTCTTTTCTGCTAATTCTTCTCCTGTTCGAAAAGGTCAACAAAATAGGATGAAGCAGACAACTCCACTACCAAGCAGACCAGAAGAAGAACCTGGTGCCTCATTCAGAAAATCCTCAAAAGAAGGATCAAAATTGGGTACTGATGCAGTGTCTTCTATTTTCCTTGTATATGAGCAAAACCCTCTATATGAAGGAAACTTAAAAGGAAACTACTTGCCAATTAATGAGAATAACGATTTAAGCATTTCAGTGTCTTCATCCAACTCATTGGAAGAAAAAGTTCTCTCTCTACCAAGGGCTCCTCCAACATCTGTTGCTTCAAATAAAAAATGTGTCTATTGGATTTCTCAGAACCATAACATTTCTGAAGGAAAAAAACTATCCAAGTCCAAAAGAAGATTCCTTAGATTTGCTTCAACTCCCAAGGTGCCATTCAGTAATCCTACAAATCTCGAGAAGAGTACGACTTTTGAAGATATTAGGCTCAACCAGTCTGAGAGAAAAGACTACATTGTGGACTCAAATATCAGGGATGCTGTCTCTTTGGGCAGAGCATCCTCTGCACCTCCTCCTCTGTGCTCAATATGTCAGCACAAGGCGCCGGCTTTTGGAAAACCTCCCAGACAGTTCTCCCTCAAAGAGCTCGAGGAAGCTACAGACGGATTTTCTGATATGAACTTCTTGGCAGAAGGCGGTTTTGGAATTGTTCATAGAGGAATCCTGAGAGATGGTCAGGTTGTAGCTGTGAAGCAGTTGAAATGTGGAGGCTTACAAGCAGATGCTGATTTTTGTAGGGAAGTTAGGGTGTTGAGTTGTGCACAACACAGAAATGTAGTGTTGCTGATTGGGTTTTGCATCGAGGACACGATGAGGTTATTAGTTTATGAGTACATATGCAATGGTTCATTGGATTTCCATTTACATGGAAATGGAAGCCAGTTAGATTGGCATTCAAGGTTAAAGATTGCAGTAGGAGCAGCGCGAGGTTTACGTTATCTTCATGAAGATTGCAGAGTGGGATGTATAGTGCATAGAGATATGCGACCTCACAATATCCTTCTAACACATGATTTTGAACCCATGGTTGCTGATTTCGGGTTGGCGAGGTGGCATTCTAAATGGTCAACCAGTATTGAGGAGCAAGTCATTGGAACTTCAGGGTATCTGGCACCAGAGTACATCAATGGTGGTATGGTATCACATAAAGTGGATGTATATGCATTTGGCATGGTTTTATTAGAGTTGATTAGTGGTAGAAGAAGCTGTGAGCTGCACCGTCTAGAGGGAAAACAATTCATATCAGAATGGTTCCATCCCATCTCTGCGTTGCAAATTCAACATTTACTAGCTAGTAGTAATCATTTAGTTGATCCATTCCTGGTCTCCGAGCAATCCCCCGACTTCTGTTATCAACTACATTCAATGGTCCGGGCCGCTTCCTTGTGTCTATGTCCAGATCCTGAATCAAGACCCTCGATGTCGAAGATTCTTCGAGTACTAGAAGGAGGAGATGCAGTTGTTCCTCTTGGTTTAGATTTCGACCCGGTTGGCTGCAGAAGTGCACACTTGGATGGTCTGACGGCTCACAAACAAATCGAAGCAAGAAGAAGCCATACTCGCACACTCTCACAATGA 1884 42.62 MVLHFHNQVEVQVRIKVVTGTQGGAVAAEAKLKGVNWVVLDRKLKNEVKNCLEELSCNIVTVKGSQPKVLRLNLECWSEPQTPFFSANSSPVRKGQQNRMKQTTPLPSRPEEEPGASFRKSSKEGSKLGTDAVSSIFLVYEQNPLYEGNLKGNYLPINENNDLSISVSSSNSLEEKVLSLPRAPPTSVASNKKCVYWISQNHNISEGKKLSKSKRRFLRFASTPKVPFSNPTNLEKSTTFEDIRLNQSERKDYIVDSNIRDAVSLGRASSAPPPLCSICQHKAPAFGKPPRQFSLKELEEATDGFSDMNFLAEGGFGIVHRGILRDGQVVAVKQLKCGGLQADADFCREVRVLSCAQHRNVVLLIGFCIEDTMRLLVYEYICNGSLDFHLHGNGSQLDWHSRLKIAVGAARGLRYLHEDCRVGCIVHRDMRPHNILLTHDFEPMVADFGLARWHSKWSTSIEEQVIGTSGYLAPEYINGGMVSHKVDVYAFGMVLLELISGRRSCELHRLEGKQFISEWFHPISALQIQHLLASSNHLVDPFLVSEQSPDFCYQLHSMVRAASLCLCPDPESRPSMSKILRVLEGGDAVVPLGLDFDPVGCRSAHLDGLTAHKQIEARRSHTRTLSQ 627
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 114737251 114742735 + Tan0003363.2 Tan01g4875 742299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4875 627 PANTHER OS01G0750732 PROTEIN 169 586 IPR050885 -
Tan01g4875 627 Gene3D Phosphorylase Kinase; domain 1 276 380 - -
Tan01g4875 627 FunFam Os07g0541700 protein 381 468 - -
Tan01g4875 627 MobiDBLite consensus disorder prediction 87 105 - -
Tan01g4875 627 SUPERFAMILY Protein kinase-like (PK-like) 286 583 IPR011009 -
Tan01g4875 627 ProSitePatterns Tyrosine protein kinases specific active-site signature. 425 437 IPR008266 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g4875 627 MobiDBLite consensus disorder prediction 87 127 - -
Tan01g4875 627 ProSiteProfiles Protein kinase domain profile. 305 590 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4875 627 Gene3D Transferase(Phosphotransferase) domain 1 381 589 - -
Tan01g4875 627 Pfam Protein kinase domain 309 581 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g4875 627 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 277 380 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4875 Tan-Chr1:114737251 Tan04g2747 Tan-Chr4:86910117 2.00E-136 dispersed
Tan01g4874 Tan-Chr1:114737251 Tan01g4875 Tan-Chr1:114737251 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67149 PF00069 Pkinase 2.70E-41 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4875 - - - 0.0