Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g4875 | ATGGTGCTTCATTTCCACAATCAAGTCGAGGTTCAAGTGAGGATTAAAGTGGTCACAGGAACACAAGGAGGAGCTGTCGCTGCCGAAGCAAAGTTAAAAGGAGTTAACTGGGTCGTACTAGACAGGAAATTGAAGAATGAGGTGAAGAATTGCCTGGAAGAACTAAGCTGCAATATTGTTACAGTGAAAGGGTCTCAACCAAAAGTTCTCAGGCTTAATTTGGAGTGCTGGAGTGAACCTCAAACTCCTTTCTTTTCTGCTAATTCTTCTCCTGTTCGAAAAGGTCAACAAAATAGGATGAAGCAGACAACTCCACTACCAAGCAGACCAGAAGAAGAACCTGGTGCCTCATTCAGAAAATCCTCAAAAGAAGGATCAAAATTGGGTACTGATGCAGTGTCTTCTATTTTCCTTGTATATGAGCAAAACCCTCTATATGAAGGAAACTTAAAAGGAAACTACTTGCCAATTAATGAGAATAACGATTTAAGCATTTCAGTGTCTTCATCCAACTCATTGGAAGAAAAAGTTCTCTCTCTACCAAGGGCTCCTCCAACATCTGTTGCTTCAAATAAAAAATGTGTCTATTGGATTTCTCAGAACCATAACATTTCTGAAGGAAAAAAACTATCCAAGTCCAAAAGAAGATTCCTTAGATTTGCTTCAACTCCCAAGGTGCCATTCAGTAATCCTACAAATCTCGAGAAGAGTACGACTTTTGAAGATATTAGGCTCAACCAGTCTGAGAGAAAAGACTACATTGTGGACTCAAATATCAGGGATGCTGTCTCTTTGGGCAGAGCATCCTCTGCACCTCCTCCTCTGTGCTCAATATGTCAGCACAAGGCGCCGGCTTTTGGAAAACCTCCCAGACAGTTCTCCCTCAAAGAGCTCGAGGAAGCTACAGACGGATTTTCTGATATGAACTTCTTGGCAGAAGGCGGTTTTGGAATTGTTCATAGAGGAATCCTGAGAGATGGTCAGGTTGTAGCTGTGAAGCAGTTGAAATGTGGAGGCTTACAAGCAGATGCTGATTTTTGTAGGGAAGTTAGGGTGTTGAGTTGTGCACAACACAGAAATGTAGTGTTGCTGATTGGGTTTTGCATCGAGGACACGATGAGGTTATTAGTTTATGAGTACATATGCAATGGTTCATTGGATTTCCATTTACATGGAAATGGAAGCCAGTTAGATTGGCATTCAAGGTTAAAGATTGCAGTAGGAGCAGCGCGAGGTTTACGTTATCTTCATGAAGATTGCAGAGTGGGATGTATAGTGCATAGAGATATGCGACCTCACAATATCCTTCTAACACATGATTTTGAACCCATGGTTGCTGATTTCGGGTTGGCGAGGTGGCATTCTAAATGGTCAACCAGTATTGAGGAGCAAGTCATTGGAACTTCAGGGTATCTGGCACCAGAGTACATCAATGGTGGTATGGTATCACATAAAGTGGATGTATATGCATTTGGCATGGTTTTATTAGAGTTGATTAGTGGTAGAAGAAGCTGTGAGCTGCACCGTCTAGAGGGAAAACAATTCATATCAGAATGGTTCCATCCCATCTCTGCGTTGCAAATTCAACATTTACTAGCTAGTAGTAATCATTTAGTTGATCCATTCCTGGTCTCCGAGCAATCCCCCGACTTCTGTTATCAACTACATTCAATGGTCCGGGCCGCTTCCTTGTGTCTATGTCCAGATCCTGAATCAAGACCCTCGATGTCGAAGATTCTTCGAGTACTAGAAGGAGGAGATGCAGTTGTTCCTCTTGGTTTAGATTTCGACCCGGTTGGCTGCAGAAGTGCACACTTGGATGGTCTGACGGCTCACAAACAAATCGAAGCAAGAAGAAGCCATACTCGCACACTCTCACAATGA | 1884 | 42.62 | MVLHFHNQVEVQVRIKVVTGTQGGAVAAEAKLKGVNWVVLDRKLKNEVKNCLEELSCNIVTVKGSQPKVLRLNLECWSEPQTPFFSANSSPVRKGQQNRMKQTTPLPSRPEEEPGASFRKSSKEGSKLGTDAVSSIFLVYEQNPLYEGNLKGNYLPINENNDLSISVSSSNSLEEKVLSLPRAPPTSVASNKKCVYWISQNHNISEGKKLSKSKRRFLRFASTPKVPFSNPTNLEKSTTFEDIRLNQSERKDYIVDSNIRDAVSLGRASSAPPPLCSICQHKAPAFGKPPRQFSLKELEEATDGFSDMNFLAEGGFGIVHRGILRDGQVVAVKQLKCGGLQADADFCREVRVLSCAQHRNVVLLIGFCIEDTMRLLVYEYICNGSLDFHLHGNGSQLDWHSRLKIAVGAARGLRYLHEDCRVGCIVHRDMRPHNILLTHDFEPMVADFGLARWHSKWSTSIEEQVIGTSGYLAPEYINGGMVSHKVDVYAFGMVLLELISGRRSCELHRLEGKQFISEWFHPISALQIQHLLASSNHLVDPFLVSEQSPDFCYQLHSMVRAASLCLCPDPESRPSMSKILRVLEGGDAVVPLGLDFDPVGCRSAHLDGLTAHKQIEARRSHTRTLSQ | 627 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 114737251 | 114742735 | + | Tan0003363.2 | Tan01g4875 | 742299 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g4875 | 627 | PANTHER | OS01G0750732 PROTEIN | 169 | 586 | IPR050885 | - | |
Tan01g4875 | 627 | Gene3D | Phosphorylase Kinase; domain 1 | 276 | 380 | - | - | |
Tan01g4875 | 627 | FunFam | Os07g0541700 protein | 381 | 468 | - | - | |
Tan01g4875 | 627 | MobiDBLite | consensus disorder prediction | 87 | 105 | - | - | |
Tan01g4875 | 627 | SUPERFAMILY | Protein kinase-like (PK-like) | 286 | 583 | IPR011009 | - | |
Tan01g4875 | 627 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 425 | 437 | IPR008266 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan01g4875 | 627 | MobiDBLite | consensus disorder prediction | 87 | 127 | - | - | |
Tan01g4875 | 627 | ProSiteProfiles | Protein kinase domain profile. | 305 | 590 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g4875 | 627 | Gene3D | Transferase(Phosphotransferase) domain 1 | 381 | 589 | - | - | |
Tan01g4875 | 627 | Pfam | Protein kinase domain | 309 | 581 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan01g4875 | 627 | FunFam | Adenine nucleotide alpha hydrolase-like domain kinase | 277 | 380 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g4875 | Tan-Chr1:114737251 | Tan04g2747 | Tan-Chr4:86910117 | 2.00E-136 | dispersed | |
Tan01g4874 | Tan-Chr1:114737251 | Tan01g4875 | Tan-Chr1:114737251 | 0.00E+00 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67149 | PF00069 | Pkinase | 2.70E-41 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g4875 | - | - | - | 0.0 |