Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4894 ATGTATCTTCTTCTTCTTTCGTTTCTTCTTCTTACAGTCCTCAAATTTCTCTACTCCACTTTCTGGCTTCCATGGAGAATTCAAATCCACTTCCAAAAGCAGGGCATAACGGGTCCTCCCTACCGTCCGATCATCGGTAACTCCGCCGATATCCGCCGTCTGTTCGCGGAGGCACAATCGAAGCCAATACCGTTTCACCACGATATACTCTGTCGCGCTCTTCCTTTTTACTCCAAATGGTCCGGTGAGTACGGAAAGACGTTTCTGTACTGGTTCGGGTCGAAACCGAGACTGGCGCTATCCGACCCGGATCTTATCAAGGAAGTGCTTCTAAATACGCGCGGGTCTTTTAGAAGGATACAGTTCAACCCGCTGTCGAAGGTGCTTTTTGGTGAGGGACTGCTCGCACTGGAGGGCGAAAAATGGGTCGCGCGCCGGAGAATTGCAAACCAGGCTTTCACCATCGAGCGTGTAAAGGGTTGGGTACCTGAAATTGTTGCTAGTGTTTCAAATGTGTTGGATAAATGGGAAGAGATGAAGGGTGGAATAATGGAGGAGTTTGAATTGGAGGTTCACACAGAATGTCGTCGCCTTTCAGCAGACGTAATTTCAAGAACCGCATTTGGAAGTAACTATGAAGAAGGGAAGCGCATCTTCAATTTGCTGGAACAGCAAACGCATCTTTTCTCCCTGGCAGTCAGAAGTGTTTATATTCCTGGCTTCAGATTTTTGCCGACCAAGAAGAACAAAGAAAGGTGGAGATTGGAGAAAGAAACTTGTGAATCAATTAAAGTGTTGATTGAGACGAATAGCAAAGGAAGGGAAAACTCAACTAATCTACTCAGCCTGTTAATGTCATCTTACAAGAACCAGAATGGAGAAGAAGAAACACTTGGAGTGGAGGAAATCATTAATGAATGTAAGACATTCTATTTTGCAGGAATGGAAACAACGGCTCATCTTTTAACTTGGGCCCTTCTACTGCTTGCAAAGCATCAAGAATGGCAAGACAAGGCCAGAGAAGAAGTTCTAAACGTCTGCGGGAATAAAACGCCTCCTGCCGCAGAGAATTTGAGTGAACTCAAACTTGTAGGTATGATAATAAACGAAACACTTCGACTTTATCCTCCAGCGGTGATGTTGACAAGGCGGACATCGAAAGAGTTGACACTAGGAGGAAGCTTAGACATTCCTGCTGGCACAGAGTTGTTCATGGCGTTGGCTGCTGTTCACCATGACAAAGATATTTGGGGAGAAGATGCAAACAGCTTCAACCCTTTGAGATTTGGTGAGCCTCGGAAACATTTAGCTTCATTTCTGCCATTTTCGTTGGGTCCCAGAATTTGTGTGGGCCAAAACTTGGCGTTGATTGAGGCCAAAGTCGCCCTGGCCATGATAATTCAACGATTCTCTTTTGCTGTTTCTCCAACCTACACTCATGCCCCTATGCTGTTTATAACCTTACAGCCTCAGTTTGGTGCTCAGCTCATCTTTAGGAGCTTATGA 1506 45.42 MYLLLLSFLLLTVLKFLYSTFWLPWRIQIHFQKQGITGPPYRPIIGNSADIRRLFAEAQSKPIPFHHDILCRALPFYSKWSGEYGKTFLYWFGSKPRLALSDPDLIKEVLLNTRGSFRRIQFNPLSKVLFGEGLLALEGEKWVARRRIANQAFTIERVKGWVPEIVASVSNVLDKWEEMKGGIMEEFELEVHTECRRLSADVISRTAFGSNYEEGKRIFNLLEQQTHLFSLAVRSVYIPGFRFLPTKKNKERWRLEKETCESIKVLIETNSKGRENSTNLLSLLMSSYKNQNGEEETLGVEEIINECKTFYFAGMETTAHLLTWALLLLAKHQEWQDKAREEVLNVCGNKTPPAAENLSELKLVGMIINETLRLYPPAVMLTRRTSKELTLGGSLDIPAGTELFMALAAVHHDKDIWGEDANSFNPLRFGEPRKHLASFLPFSLGPRICVGQNLALIEAKVALAMIIQRFSFAVSPTYTHAPMLFITLQPQFGAQLIFRSL 501
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 114856820 114859919 - Tan0021710.1 Tan01g4894 742318
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4894 501 Gene3D Cytochrome P450 21 500 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4894 501 SUPERFAMILY Cytochrome P450 34 499 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4894 501 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4894 501 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4894 501 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4894 501 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4894 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Tan01g4894 501 PANTHER CYTOCHROME P450 FAMILY MEMBER 9 493 IPR050665 GO:0004497(PANTHER)
Tan01g4894 501 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4894 501 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4894 501 PRINTS E-class P450 group I signature 81 100 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4894 501 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4894 501 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4894 501 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan01g4894 501 FunFam Cytochrome P450 734A1 21 501 - -
Tan01g4894 501 Pfam Cytochrome P450 77 477 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4894 Tan-Chr1:114856820 Tan09g1387 Tan-Chr9:65981536 2.40E-121 dispersed
Tan01g4894 Tan-Chr1:114856820 Tan01g4895 Tan-Chr1:114861956 2.30E-220 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4894 - - - 0.0