Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan01g4894 | ATGTATCTTCTTCTTCTTTCGTTTCTTCTTCTTACAGTCCTCAAATTTCTCTACTCCACTTTCTGGCTTCCATGGAGAATTCAAATCCACTTCCAAAAGCAGGGCATAACGGGTCCTCCCTACCGTCCGATCATCGGTAACTCCGCCGATATCCGCCGTCTGTTCGCGGAGGCACAATCGAAGCCAATACCGTTTCACCACGATATACTCTGTCGCGCTCTTCCTTTTTACTCCAAATGGTCCGGTGAGTACGGAAAGACGTTTCTGTACTGGTTCGGGTCGAAACCGAGACTGGCGCTATCCGACCCGGATCTTATCAAGGAAGTGCTTCTAAATACGCGCGGGTCTTTTAGAAGGATACAGTTCAACCCGCTGTCGAAGGTGCTTTTTGGTGAGGGACTGCTCGCACTGGAGGGCGAAAAATGGGTCGCGCGCCGGAGAATTGCAAACCAGGCTTTCACCATCGAGCGTGTAAAGGGTTGGGTACCTGAAATTGTTGCTAGTGTTTCAAATGTGTTGGATAAATGGGAAGAGATGAAGGGTGGAATAATGGAGGAGTTTGAATTGGAGGTTCACACAGAATGTCGTCGCCTTTCAGCAGACGTAATTTCAAGAACCGCATTTGGAAGTAACTATGAAGAAGGGAAGCGCATCTTCAATTTGCTGGAACAGCAAACGCATCTTTTCTCCCTGGCAGTCAGAAGTGTTTATATTCCTGGCTTCAGATTTTTGCCGACCAAGAAGAACAAAGAAAGGTGGAGATTGGAGAAAGAAACTTGTGAATCAATTAAAGTGTTGATTGAGACGAATAGCAAAGGAAGGGAAAACTCAACTAATCTACTCAGCCTGTTAATGTCATCTTACAAGAACCAGAATGGAGAAGAAGAAACACTTGGAGTGGAGGAAATCATTAATGAATGTAAGACATTCTATTTTGCAGGAATGGAAACAACGGCTCATCTTTTAACTTGGGCCCTTCTACTGCTTGCAAAGCATCAAGAATGGCAAGACAAGGCCAGAGAAGAAGTTCTAAACGTCTGCGGGAATAAAACGCCTCCTGCCGCAGAGAATTTGAGTGAACTCAAACTTGTAGGTATGATAATAAACGAAACACTTCGACTTTATCCTCCAGCGGTGATGTTGACAAGGCGGACATCGAAAGAGTTGACACTAGGAGGAAGCTTAGACATTCCTGCTGGCACAGAGTTGTTCATGGCGTTGGCTGCTGTTCACCATGACAAAGATATTTGGGGAGAAGATGCAAACAGCTTCAACCCTTTGAGATTTGGTGAGCCTCGGAAACATTTAGCTTCATTTCTGCCATTTTCGTTGGGTCCCAGAATTTGTGTGGGCCAAAACTTGGCGTTGATTGAGGCCAAAGTCGCCCTGGCCATGATAATTCAACGATTCTCTTTTGCTGTTTCTCCAACCTACACTCATGCCCCTATGCTGTTTATAACCTTACAGCCTCAGTTTGGTGCTCAGCTCATCTTTAGGAGCTTATGA | 1506 | 45.42 | MYLLLLSFLLLTVLKFLYSTFWLPWRIQIHFQKQGITGPPYRPIIGNSADIRRLFAEAQSKPIPFHHDILCRALPFYSKWSGEYGKTFLYWFGSKPRLALSDPDLIKEVLLNTRGSFRRIQFNPLSKVLFGEGLLALEGEKWVARRRIANQAFTIERVKGWVPEIVASVSNVLDKWEEMKGGIMEEFELEVHTECRRLSADVISRTAFGSNYEEGKRIFNLLEQQTHLFSLAVRSVYIPGFRFLPTKKNKERWRLEKETCESIKVLIETNSKGRENSTNLLSLLMSSYKNQNGEEETLGVEEIINECKTFYFAGMETTAHLLTWALLLLAKHQEWQDKAREEVLNVCGNKTPPAAENLSELKLVGMIINETLRLYPPAVMLTRRTSKELTLGGSLDIPAGTELFMALAAVHHDKDIWGEDANSFNPLRFGEPRKHLASFLPFSLGPRICVGQNLALIEAKVALAMIIQRFSFAVSPTYTHAPMLFITLQPQFGAQLIFRSL | 501 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 114856820 | 114859919 | - | Tan0021710.1 | Tan01g4894 | 742318 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan01g4894 | 501 | Gene3D | Cytochrome P450 | 21 | 500 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4894 | 501 | SUPERFAMILY | Cytochrome P450 | 34 | 499 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4894 | 501 | PRINTS | P450 superfamily signature | 313 | 330 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4894 | 501 | PRINTS | P450 superfamily signature | 449 | 460 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4894 | 501 | PRINTS | P450 superfamily signature | 440 | 449 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4894 | 501 | PRINTS | P450 superfamily signature | 366 | 377 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4894 | 501 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 442 | 451 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan01g4894 | 501 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 9 | 493 | IPR050665 | GO:0004497(PANTHER) | |
| Tan01g4894 | 501 | PRINTS | E-class P450 group I signature | 302 | 319 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4894 | 501 | PRINTS | E-class P450 group I signature | 198 | 216 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4894 | 501 | PRINTS | E-class P450 group I signature | 81 | 100 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4894 | 501 | PRINTS | E-class P450 group I signature | 322 | 348 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4894 | 501 | PRINTS | E-class P450 group I signature | 439 | 449 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4894 | 501 | PRINTS | E-class P450 group I signature | 449 | 472 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan01g4894 | 501 | FunFam | Cytochrome P450 734A1 | 21 | 501 | - | - | |
| Tan01g4894 | 501 | Pfam | Cytochrome P450 | 77 | 477 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan01g4894 | Tan-Chr1:114856820 | Tan09g1387 | Tan-Chr9:65981536 | 2.40E-121 | dispersed | |
| Tan01g4894 | Tan-Chr1:114856820 | Tan01g4895 | Tan-Chr1:114861956 | 2.30E-220 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan01g4894 | - | - | - | 0.0 |