Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g4975 ATGGCTGATCATGGAATTAGCTCAGGCGCTTCTAATTCTGGTAGCAGAAGAATAATGTGGTGTTCAATTCCTGAGAAGCTTCAACTGCATGGCGCCATGTTGGCCTTGCAGTTTGGCTATGCTGGTTTCCACGTTGTCTCAAGGGCTGCCCTTAATATGGGCATTAGCAAACTTGTCTTCCTTGTTTATAGGAACATCATTGCCTTTCTTCTCCTTCTTCCCTTTGCATATTTCCTCGAAAAGAAGGAGCGCCCTGCCTTTTCTCTCAATTTTCTGCTTCAGTTCTTCCTTCTTGCACTTGTTGGAATCACGGCGAATCAAGGGTTTTACTTGCTAGGTTTGGAGAACACGTCGCCGACGTTTGCATCGGCGATACAAAACTCTGTTCCGGCGATTACATTCCTCATGGCTGCATTGCTCCGAATAGAACAAGTGCGACTGAACAGAAAAGATGGTATAGCAAAAGTGATGGGAACAATATGCTGCGTTGCCGGGGCCACAGTGATCACTCTATACAAAGGTCCAACAATATACAGCCCAGTTCCTTCACTGCAATTTCCAACACCCATTTTTGCTTCTCTTGGGGACGCAAAGCCCAAAAGCTGGACCCTGGGCTGCGTCTTTTTGATCGGCCATTGCTTGTCCTGGTCTGGATGGCTCGTTTTGCAAGCTCCAGTTTTGAAGAAGTACCCGGCTCGTCTCTCTGTCACTTCTTTTACTTGTTTCTTTGGGATAATTCAATTTGTCATCATCGCTGCTATTGCTGAGAGAGATGCTCAGGCTTGGCTCTTCCACTCTGGTGGCGAAATCTTCAGCGTTTTATATGCCGGAGTGGTAGCTTCTGGAATTGCTTTCGCTGTGCAGATATGGTGCATTGACAGAGGTGGCCCTGTCTTCGTCGCTGTTTATCAACCTGTTCAGACTCTCGTTGTCGCCATCATGGCTTCCTTCGCCTTGGGTGAAGAGTTCTACTTGGGAGGGATCATCGGGGCGGTGCTGATCATCACCGGCTTATACTTCGTTCTATGGGGCAAAAACGAAGAGAGAAAATTTGCACTTGAGAAGGCTGCAATCCTCTCCGCTCCCGACCACAGTAACAACAGAACACCCGCTCACATCAAGCCCTCCATTACTCAGCCACTTCTCATCCATTCATCAAACGACAACGTTTGA 1173 47.74 MADHGISSGASNSGSRRIMWCSIPEKLQLHGAMLALQFGYAGFHVVSRAALNMGISKLVFLVYRNIIAFLLLLPFAYFLEKKERPAFSLNFLLQFFLLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAALLRIEQVRLNRKDGIAKVMGTICCVAGATVITLYKGPTIYSPVPSLQFPTPIFASLGDAKPKSWTLGCVFLIGHCLSWSGWLVLQAPVLKKYPARLSVTSFTCFFGIIQFVIIAAIAERDAQAWLFHSGGEIFSVLYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFYLGGIIGAVLIITGLYFVLWGKNEERKFALEKAAILSAPDHSNNRTPAHIKPSITQPLLIHSSNDNV 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 115531171 115534262 - Tan0021686.1 Tan01g4975 742399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g4975 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 261 347 - -
Tan01g4975 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 63 173 - -
Tan01g4975 390 PANTHER WAT1-RELATED PROTEIN 32 354 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Tan01g4975 390 Pfam EamA-like transporter family 34 170 IPR000620 GO:0016020(InterPro)
Tan01g4975 390 Pfam EamA-like transporter family 204 342 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4975 Tan-Chr1:115531171 Tan09g1858 Tan-Chr9:69866110 1.60E-104 dispersed
Tan01g4975 Tan-Chr1:115531171 Tan02g2023 Tan-Chr2:89481846 4.80E-165 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g4975 - - - 0.0