Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g4998 | ATGTCGGCCGGACTCGGAAAATGCAGCAAAATCCGGCACATTGTCAGGCTCCGTCAAATGCTCCGGCGGTGGCGCAACAAGGCCCGAATGTCCGCCAATCGCATCCCCTCCGACGTTCCCGCCGGACACGTGGCCGTCTGCGTAGGAACCAGCTGCCGGCGTTTCGTCGTCCGGGCAACTTACTTGAACCACCCGGTTTTCAAGAAGCTTCTGGTCCAAGCGGAAGAGGAGTACGGGTTCACCAATCAGGGTCCCTTGGCAATCCCTTGTGACGAGTCGGTTTTCGAAGAAGTGATCCGGTTCATCTCCAGATCCGAGTCGCCCAACTCGGGGCGGTTCATGAAATTGGACGATTTTCAGAGTTACTGCCACATCGGAATCAGAACCGGGCTCGATTTATGGCCGGAATCTCGGCCTTTGCTTCATGGGTTGGCCGAGAAATCCATCTGCTCCGGAGAATGCTTATGGAGATGGCAAAACTGGTGGAGGGATCATTCCACCGTGGTCGTCCCGAGCCCGAATCGGAGTCGGAAAGGAAGAAAACAGCTACAACCACAGAAAGTGTTGCTAATTCGGTTAGAGGGCTACTTCTTGTAA | 597 | 55.11 | MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFMKLDDFQSYCHIGIRTGLDLWPESRPLLHGLAEKSICSGECLWRWQNWWRDHSTVVVPSPNRSRKGRKQLQPQKVLLIRLEGYFL | 198 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 115725605 | 115726545 | + | Tan0000420.1 | Tan01g4998 | 742422 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g4998 | 198 | PANTHER | AUXIN-INDUCED PROTEIN-LIKE-RELATED | 17 | 101 | IPR003676 | GO:0009733(InterPro) | |
Tan01g4998 | 198 | Pfam | Auxin responsive protein | 16 | 102 | IPR003676 | GO:0009733(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g4998 | Tan-Chr1:115725605 | Tan02g0737 | Tan-Chr2:6895292 | 1.10E-51 | dispersed | |
Tan01g3762 | Tan-Chr1:102422479 | Tan01g4998 | Tan-Chr1:115725605 | 2.40E-17 | transposed | |
Tan01g4998 | Tan-Chr1:115725605 | Tan05g1225 | Tan-Chr5:12188271 | 1.00E-46 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g4998 | K14488 | - | csv:101216342 | 301.982 |