Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g5034 ATGGCTACACAAATCTCAGTCATATTATATCTCTTAACAATTCAAGTTTCAATATCAGGAGTATTATCCACGACTTTCAGCATAGTAAATAAATGTGATTACACGGTATGGCCGGGAATCCTCTCAAACGCCGGAATTTCACCACTTCCGACTACTGGTTTCGTCCTCGCCTCCGGTGAGTCCAAAACGCTCTCCGCTCCGGCCTCTTGGGGCGGCCGGTTCTGGGGCCGAACCCACTGCTCCCAAGACTCCACTGGCAAATTCTCTTGCCTCACCGGTGATTGCGGCTCCGACAAAGTCGAGTGCAGCGGAAACGGCGCCAAGCCGCCGGCTACTCTGGCGGAGTTCACCCTCGACGGCGCCGACGGGCTGGATTTCTTCGACGTGAGTTTGGTCGACGGTTACAACATCCCTATGCTGGTGGTCCCACAGGGCGGCACCGGCGAGAAATGCGTGAGTACCGGATGCGTGGTGGATTTGAACGGCGCGTGTCCTTCAGAGCTCAAGGTTACGAGCGTGGACGGCGGACAGAGTGTCGCGTGTAAAAGCGCGTGTGAAGCATTTAACCAGCCGCAGTTCTGTTGTAGTGGCGCGTACGCGACTCCCGATACTTGCAAGCCCTCTCCGTACTCGCAAGCGTTTAAAAACGCGTGCCCACGCGCCTACAGCTACGCTTACGACGATTTAACCAGCACGTTTACATGTCTCGACGCCGATTATATCATCACATTTTGCCCATCGCCCAACACGAGGTAA 756 54.76 MATQISVILYLLTIQVSISGVLSTTFSIVNKCDYTVWPGILSNAGISPLPTTGFVLASGESKTLSAPASWGGRFWGRTHCSQDSTGKFSCLTGDCGSDKVECSGNGAKPPATLAEFTLDGADGLDFFDVSLVDGYNIPMLVVPQGGTGEKCVSTGCVVDLNGACPSELKVTSVDGGQSVACKSACEAFNQPQFCCSGAYATPDTCKPSPYSQAFKNACPRAYSYAYDDLTSTFTCLDADYIITFCPSPNTR 251
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 115914840 115917158 + Tan0001904.2 Tan01g5034 742458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g5034 251 Pfam Thaumatin family 30 246 IPR001938 -
Tan01g5034 251 SMART tha2 26 246 IPR001938 -
Tan01g5034 251 PIRSF PR5 1 251 IPR001938 -
Tan01g5034 251 FunFam THAUMATIN-LIKE PROTEIN 1 24 246 - -
Tan01g5034 251 SUPERFAMILY Osmotin, thaumatin-like protein 24 247 IPR037176 -
Tan01g5034 251 ProSiteProfiles Thaumatin family profile. 23 246 IPR001938 -
Tan01g5034 251 Gene3D Thaumatin 24 246 IPR037176 -
Tan01g5034 251 PANTHER OS03G0233200 PROTEIN 7 246 IPR001938 GO:0005576(PANTHER)|GO:0006952(PANTHER)
Tan01g5034 251 CDD TLP-PA 25 245 - -
Tan01g5034 251 PRINTS Pathogenesis-related protein signature 236 245 IPR001938 -
Tan01g5034 251 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Tan01g5034 251 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Tan01g5034 251 PRINTS Pathogenesis-related protein signature 73 84 IPR001938 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g5034 Tan-Chr1:115914840 Tan02g2082 Tan-Chr2:90348461 1.90E-114 dispersed
Tan01g5033 Tan-Chr1:115914840 Tan01g5034 Tan-Chr1:115914840 1.40E-146 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g5034 - - - 0.0