Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g5036 ATGAGGAAGAAGTCGCTCAATCCTGTTGTTAGCAGTTTGTTTATCTTCTGTTTACTTCTTTTCTCTGCCCGATTTTGCTTCGCCAATGGCGATATGGAAGCGCTGTTGAAAATGAAGAGCGCCATGATTGTACCGGGGAGGTCGGGGCTTAGTGATTGGCAGCCGTCGTCTTCGCCGTCTGCTCATTGCTTCTTCTCTGGAGTTTCGTGCGATGCCGATTCTAGAGTTGTTGCGCTTAACGTTTCGAATTTCCGTCTGTTTGGCCGGATTCCGCCGGAGATTGGGATGTTGGAGAAGCTTGTGAACTTGACGTTAGTGAATGACAATCTCACGGGAGAGCTTCCTCTTGAAATGGCGAAACTCACATCGCTTAAGATTGTTAATCTCTCCACCAACCTACTCCGTGATAGTTTTCCGGCGGAAATCGCGCTCGGAATGACGGAACTCGAGGTTTTCGATATCTATAACAACAATTTCTCTGGTCCGCTTCCAGTGGAGTTCGCCAAGTTGAAGAAGCTTAAGTATCTTGACCTCGGCGGAGGCTTCTTTACCGGTCAGATTCCGGAGGTTTACTCCGAGATGCAGACGTTGGAGTTTTTAAGCGTGAGGGGAAATGCGCTTACCGGAAGGATTCCGGCGAGTTTAGCGCGGTTGAAGAATCTTAGGTATCTTTATGCAGGATATTTTAATCGTTACGACGGTGGAATTCCAGCCGAGTTTGGATCGTTAAGTTCTCTCGAGCTTCTCGATTTAGGCAACTGTAATCTCTCCGGTGAAATCCCTCCGAGTTTGGGGAATTTGAAGCACTTACACAGTCTATTTCTACAAGTAAACAATCTTACCGGTCGGATTCCCTCTGAACTTTCCGGTCTCATTAGCCTCAAGTCACTGGACCTCTCGCTGAACGAACTGACCGGAGAGATACCGGCAAGTTTCGCGGCACTGCAGAATATTACACTGATCAATTTATTCAGCAACAAACTTCACGGTCCAATTCCTGGGTTCGTTGGTGATTTTCCACATCTCGAAGTGCTTCAGTTGTGGAGTAACAACTTCACGCTCGAGCTCCCTGAGAATCTCGGGCGTAACGGAAAACTGTTTCTGCTCGACGTGGCTACAAATCACCTAACTGGGCTCATTCCTCCGGTTTTATGTAATGGTAGGTTGAAGACTTTGATTCTGTTGGATAATTACTTCTTCGGGCCCATCCCTGAGGAATTAGGCCGATGTGATTCGCTTACGAAGATAAGAATTGCGGGAAATTTCTTCAATGGAACGGTTCCGGCAGGGTTCTTTAACTTTCCGGCGCTGGAGCTACTTGATATCAGTAACAATTACTTCTCCGGCGCTCTTCCGTCGCAAATGTCAGGCTATTTTCTTGGAAGTCTACAGCTCAGTAACAATCACATTACCGGCGAAATTCCGGCGGCGATTAAGAATTTAGAAAACTTGCAGGTTCTTTCTCTGGAACATAACCAATTCACCGGAGATTTACCTGTGGAAATATTTGAATTGAATAAGTTGCTGAGGATTAACATCAGTTTCAACAACATTAGCGGCGAAATTCCGCATTCGGTCGTTCAGTGCACATCTTTAACGTCAATTGATCTCAGTGAAAATTACTTCGTTGGCCAAATTCCCAAAGGAATTTCGTATCTGAAAATTTTGAGTGTCCTCAATTTGTCAAGAAATCAGCTGACGGGCCAAATTCCGAATGAAATTCGGGGGATGATGAGTCTTACAACTCTAGATTTGTCATACAACAACTTCTTTGGTAGAATCCCCACCGGCGGTCAGTTTTCGGTATTCAACGGCAGCGCATTCGCTGGAAACCCTAACCTCTGTTTTCCCAATCACGGGCCTTGCGCATCGCTACGCAGTAATATGAAATCCATTAAGTTAATCATCCCAATCGTTGCAATATTCATCATTTTGTTATGTGTACTCGCCGCAATTTACATCAGGAAGATAAAGAGGATTCAGAAATCAAAGGCATGGAAACTAACGGCGTTCCAACGCCTCAATTTCAAACCGGAGGACGTCCTCGAGTGCTTGAAGGAGGAAAATATCATCGGCAAAGGCGGCGCCGGGGTCGTCTACCGTGGATCTATGCCGGACGGCTCCATCGTGGCGATCAAACTGTTGTTAGGAAGTGGCCGGAACGACCACGGTTTCTCGGCGGAAATTCAGACCCTAGGGCGAATCAAACACCGGAATATCGTCAGGCTTTTGGGGTACGTTTCGAACAGAGACACGAATCTGCTGCTGTACGAGTACATGCCCAATGGAAGCTTGGACCAGAGGCTGCATGGAGTGAAGGGCGGGCATTTGCACTGGGAGTTGCGGTACAAGATCGCGATGGAAGCCGCCAAGGGGCTCTGTTACTTGCACCATGATTGTACGCCGCTGATCATTCACAGAGACGTGAAGTCCAATAATATACTGCTGGATAACTTCTTTGAGGCGCATGTCTCTGACTTTGGGCTCGCCAAGTTCTTGCAGAACGGCGGCGCCTCCGAGTGTATGTCCTCCATTGCCGGCTCCTATGGCTACATCGCTCCAGAATACGCCTACACACTGAAAGTGGATGAGAAGAGCGACGTGTACAGTTTCGGTGTGGTTCTGTTAGAGCTGATAGCCGGACGGAAGCCAGTGGGCGATTTTGGCGAAGGCGTGGACATTGTGAGATGGGTCCTAAAAACCACATCAGAACTCTCTCAGCCGTCCGATGCAGCCTCAGTATTAGCCGTGGTGGACTCGCGCCTCACCGAATACCCTCTCCAAGGCGTCATCCATCTCTTCAAAATAGCGATGATGTGTGTTGAGGAAGACAGCTCTGCAAGGCCAACCATGAGGGAAGTCGTCCACATGCTCTCAAATCCCCCAAGGTCTGCCCCTACTCTCATCAACCTCTAA 2916 48.01 MRKKSLNPVVSSLFIFCLLLFSARFCFANGDMEALLKMKSAMIVPGRSGLSDWQPSSSPSAHCFFSGVSCDADSRVVALNVSNFRLFGRIPPEIGMLEKLVNLTLVNDNLTGELPLEMAKLTSLKIVNLSTNLLRDSFPAEIALGMTELEVFDIYNNNFSGPLPVEFAKLKKLKYLDLGGGFFTGQIPEVYSEMQTLEFLSVRGNALTGRIPASLARLKNLRYLYAGYFNRYDGGIPAEFGSLSSLELLDLGNCNLSGEIPPSLGNLKHLHSLFLQVNNLTGRIPSELSGLISLKSLDLSLNELTGEIPASFAALQNITLINLFSNKLHGPIPGFVGDFPHLEVLQLWSNNFTLELPENLGRNGKLFLLDVATNHLTGLIPPVLCNGRLKTLILLDNYFFGPIPEELGRCDSLTKIRIAGNFFNGTVPAGFFNFPALELLDISNNYFSGALPSQMSGYFLGSLQLSNNHITGEIPAAIKNLENLQVLSLEHNQFTGDLPVEIFELNKLLRINISFNNISGEIPHSVVQCTSLTSIDLSENYFVGQIPKGISYLKILSVLNLSRNQLTGQIPNEIRGMMSLTTLDLSYNNFFGRIPTGGQFSVFNGSAFAGNPNLCFPNHGPCASLRSNMKSIKLIIPIVAIFIILLCVLAAIYIRKIKRIQKSKAWKLTAFQRLNFKPEDVLECLKEENIIGKGGAGVVYRGSMPDGSIVAIKLLLGSGRNDHGFSAEIQTLGRIKHRNIVRLLGYVSNRDTNLLLYEYMPNGSLDQRLHGVKGGHLHWELRYKIAMEAAKGLCYLHHDCTPLIIHRDVKSNNILLDNFFEAHVSDFGLAKFLQNGGASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGRKPVGDFGEGVDIVRWVLKTTSELSQPSDAASVLAVVDSRLTEYPLQGVIHLFKIAMMCVEEDSSARPTMREVVHMLSNPPRSAPTLINL 971
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 115927786 115933156 - Tan0003234.1 Tan01g5036 742460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g5036 971 Gene3D Ribonuclease Inhibitor 230 386 IPR032675 -
Tan01g5036 971 SUPERFAMILY L domain-like 388 620 - -
Tan01g5036 971 Pfam Leucine rich repeat N-terminal domain 29 71 IPR013210 -
Tan01g5036 971 SMART LRR_typ_2 291 314 IPR003591 -
Tan01g5036 971 SMART LRR_typ_2 481 505 IPR003591 -
Tan01g5036 971 SMART LRR_typ_2 243 267 IPR003591 -
Tan01g5036 971 SMART LRR_typ_2 339 363 IPR003591 -
Tan01g5036 971 SMART LRR_typ_2 553 576 IPR003591 -
Tan01g5036 971 SMART LRR_typ_2 121 145 IPR003591 -
Tan01g5036 971 SUPERFAMILY Protein kinase-like (PK-like) 675 958 IPR011009 -
Tan01g5036 971 Pfam Leucine rich repeat 462 518 IPR001611 GO:0005515(InterPro)
Tan01g5036 971 Pfam Leucine rich repeat 531 590 IPR001611 GO:0005515(InterPro)
Tan01g5036 971 Pfam Protein kinase domain 687 956 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g5036 971 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 15 959 IPR050647 -
Tan01g5036 971 FunFam LRR receptor-like serine/threonine-protein kinase EFR 336 627 - -
Tan01g5036 971 Gene3D Transferase(Phosphotransferase) domain 1 760 965 - -
Tan01g5036 971 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 231 335 - -
Tan01g5036 971 Gene3D Ribonuclease Inhibitor 30 144 IPR032675 -
Tan01g5036 971 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 760 969 - -
Tan01g5036 971 Gene3D Ribonuclease Inhibitor 387 623 IPR032675 -
Tan01g5036 971 Gene3D Ribonuclease Inhibitor 145 229 IPR032675 -
Tan01g5036 971 SMART serkin_6 685 958 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g5036 971 ProSitePatterns Serine/Threonine protein kinases active-site signature. 804 816 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g5036 971 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 654 759 - -
Tan01g5036 971 FunFam Leucine-rich repeat receptor-like protein kinase 28 189 - -
Tan01g5036 971 ProSiteProfiles Protein kinase domain profile. 685 968 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g5036 971 Gene3D Phosphorylase Kinase; domain 1 652 759 - -
Tan01g5036 971 SUPERFAMILY RNI-like 79 423 - -
Tan01g5036 971 Pfam Leucine Rich Repeat 245 267 IPR001611 GO:0005515(InterPro)
Tan01g5036 971 Pfam Leucine Rich Repeat 293 315 IPR001611 GO:0005515(InterPro)
Tan01g5036 971 Pfam Leucine Rich Repeat 437 455 IPR001611 GO:0005515(InterPro)
Tan01g5036 971 Pfam Leucine Rich Repeat 149 170 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g5036 Tan-Chr1:115927786 Tan03g2898 Tan-Chr3:82018236 9.20E-117 dispersed
Tan01g5036 Tan-Chr1:115927786 Tan03g1728 Tan-Chr3:73213135 3.70E-134 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67154 PF00069 Pkinase 6.00E-43 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g5036 - - - 0.0