Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g5042 ATGCAAGGCATTTCCTTTTGTGTCTTCGTTTTGGTTTCTATCATCTTTTTTATTCTTTCTGAAAATGGTAAAATAGCTGCTGCAGCTGGAAACAATGGCGTTTATATCGTCTACATGGGATCCGCGTCTGGTTCGAGAACCGACTTCCTTCGCCTTCTTAGTTCTGTCAACAGGCGGAATCGAAATGCAGTGGTGCACACGTACAGACACGGGTTCACAGGATTTGCAGCTCGTATGTCAGAACATGAAGCCGAGGCCATGCGACATACACCTGGAGTTGTTTCGGTGTTTCCAGATCCCATATTGAAGTTGCACACAACTCATTCCTGGGATTTCTTGGTCAGTCAGACAAGTGTAAAGATCGACGCCAATCCACAATCAGATCCCCCCATCTCTTCCTCTCATCCATCCGATACCATTATCGGCATCTTGGACACCGGTATCTGGCCGGAATCTGAAAGCTTTAATGACAAGGGTATGGGTCCAATACCGGCGAGGTGGAAAGGTACCTGCATGGTAGGCAATGACTTCAATTCCTCCAACTGTAACAAAAAAATCATTGGTGCAAGATTTTACGAAAGTTCTGAGAGCGACGGGATACGGTACCACTCACCTCGAGACGAAGCTGGACATGGCACCCACGTGGCTTCAACGGCGGCCGGCAGCGCCGTGGCCAATGCATCCTACTATGGCCTCGCAGCGGGGACGGCCAAGGGCGGCTCCCCCGGCTCAAGGATCGCCATGTACAGAGTCTGCATGCTCGACGGCTGCCGTGGATCGGCCATCATGGCGGCGTTTGACGATGCCATCGCCGATGGGGTCGATTGCTTGTCCTTGTCTCTCGGTACACCCTACTACTTCAGACAGGAACTGAAGAACGACCCTATTGCCATTGGGGCCTTTCATGCAGTTGAGAAGGGGATTGTAGTTGTCTGCTCTGCTGGAAACGACGGCCCCACCACTGAATCCGTGGTCAATGACGCGCCATGGATTTTAACAGTGGCTGCCTCCACCATTGATCGGGTTTTTGAGTCTGATGTTGTGTTGGGCAACAACAAAGTGATCAAGGGAGAAGGTATAAATTTCTCTGCTCTTAAAAAATCCCCTGTATACACACTGATACAAGGCAAGTCAGCCAAGAAAGCGGATGCCAGTGAAGACAGTGCGAGGATTTGTTCTCAAGACTCCATGGACGAAGCTCTGGTGAAGGGGAAGATAGTTATATGCGAAAACAGTGTCGAAGAAGGCGGTTCTGATTGGCAGGGTCAGTCTGAAACAGTGAAGAGTCTTGGAGGGATCGGCCTAGTTTTGATTGATGATCAATCAAAATTAGTTGCAGAGAAGTTTGGTGCTTTTCCCATGACAGCTATTAGCTCAAAGGATGGTGCTGTGCTCCTCTCCTATGTCCAATCAAGCGGGAATCCAGTTGCTACAATCCAACCCACTGTGACCATAATAAACCATAAGCCAGCGCCTGCTATAGCATACTTTTCATCCAGAGGGCCTAATCCCGCAGTACTAAACATAATCAAGCCGGACATATCAGCTCCTGGAGTGAACATTCTTGCAGCGTGGCTTGGCAATGACTCTAACTCTATTCCACAACCAACAAAGTCACCATTCTTCAATGTGATCTCAGGAACTTCAATGTCCTGCCCGCACGTCTCCGGCATAGCAGCCTTCATTAAATCTCAAAACCCCACATGGAGTCCCTCAGCAATCAAGTCAGCCATCATGACAACAGCAATCCAAACTAATAACTTGGGATCGTCGATGACTTGTGATTCGGGGTTGGTAGCCACACCTTATGATTATGGGGCAGGAGAAATATCAACATCTGGAGCATTACAACCAGGACTAGTCTATGAAACTAGTACAACAGACTACTTAGATTACCTTTGCTACCGAGGCTATAACCTGTCCACCATTAAGAGCATTTCAAATACTGTTCCCGAAGGGTTTGATTGCCCCAAGAATTCAACTGAAGACCACATATCCAACATGAACTACCCAACAATAGCAGTGTCCGAATTGACAGACAAGGAAAGCAAGAAAATAAGTAGAACAGTTACAAATGTTGGTGGCGATGGTGAAACAGTTTACACAGTTAGCGTGGACGCACCTGGGGAAGTAGATGTCAAAGTGATCCCGGAGAAATTGGAATTTACAAAGAACAATCAGAAGCAGAGTTACCAAGTGGTGTTCACCTTAACTGCAGGCACACTGAATAAAGTAGTCTTTGGATCAATAACTTGGACCAACGGAAAATATCGAGTCCGGAGTTCATTTGTCGTAACTAGTAACTTATTGACCTAG 2316 47.37 MQGISFCVFVLVSIIFFILSENGKIAAAAGNNGVYIVYMGSASGSRTDFLRLLSSVNRRNRNAVVHTYRHGFTGFAARMSEHEAEAMRHTPGVVSVFPDPILKLHTTHSWDFLVSQTSVKIDANPQSDPPISSSHPSDTIIGILDTGIWPESESFNDKGMGPIPARWKGTCMVGNDFNSSNCNKKIIGARFYESSESDGIRYHSPRDEAGHGTHVASTAAGSAVANASYYGLAAGTAKGGSPGSRIAMYRVCMLDGCRGSAIMAAFDDAIADGVDCLSLSLGTPYYFRQELKNDPIAIGAFHAVEKGIVVVCSAGNDGPTTESVVNDAPWILTVAASTIDRVFESDVVLGNNKVIKGEGINFSALKKSPVYTLIQGKSAKKADASEDSARICSQDSMDEALVKGKIVICENSVEEGGSDWQGQSETVKSLGGIGLVLIDDQSKLVAEKFGAFPMTAISSKDGAVLLSYVQSSGNPVATIQPTVTIINHKPAPAIAYFSSRGPNPAVLNIIKPDISAPGVNILAAWLGNDSNSIPQPTKSPFFNVISGTSMSCPHVSGIAAFIKSQNPTWSPSAIKSAIMTTAIQTNNLGSSMTCDSGLVATPYDYGAGEISTSGALQPGLVYETSTTDYLDYLCYRGYNLSTIKSISNTVPEGFDCPKNSTEDHISNMNYPTIAVSELTDKESKKISRTVTNVGGDGETVYTVSVDAPGEVDVKVIPEKLEFTKNNQKQSYQVVFTLTAGTLNKVVFGSITWTNGKYRVRSSFVVTSNLLT 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 115990859 115996159 - Tan0021778.1 Tan01g5042 742466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g5042 771 Pfam Subtilase family 138 586 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Tan01g5042 771 Pfam Peptidase inhibitor I9 34 105 IPR010259 -
Tan01g5042 771 ProSitePatterns Serine proteases, subtilase family, serine active site. 547 557 IPR023828 -
Tan01g5042 771 FunFam subtilisin-like protease SBT1.5 340 486 - -
Tan01g5042 771 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
Tan01g5042 771 PRINTS Subtilisin serine protease family (S8) signature 546 562 IPR015500 -
Tan01g5042 771 PRINTS Subtilisin serine protease family (S8) signature 207 220 IPR015500 -
Tan01g5042 771 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 762 IPR045051 -
Tan01g5042 771 Pfam PA domain 392 464 IPR003137 -
Tan01g5042 771 SUPERFAMILY Subtilisin-like 135 617 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan01g5042 771 CDD PA_subtilisin_like 346 479 - -
Tan01g5042 771 Gene3D - 340 486 - -
Tan01g5042 771 ProSiteProfiles Serine proteases, subtilase domain profile. 109 616 - -
Tan01g5042 771 ProSitePatterns Serine proteases, subtilase family, histidine active site. 211 221 IPR022398 -
Tan01g5042 771 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 105 IPR037045 -
Tan01g5042 771 Gene3D Peptidase S8/S53 domain 138 629 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan01g5042 771 FunFam Subtilisin-like protease SBT1.5 138 350 - -
Tan01g5042 771 CDD Peptidases_S8_3 102 583 IPR034197 -
Tan01g5042 771 Pfam Fibronectin type-III domain 667 765 IPR041469 -
Tan01g5042 771 Gene3D - 633 768 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g5042 Tan-Chr1:115990859 Tan02g2319 Tan-Chr2:91943936 3.30E-178 dispersed
Tan01g5042 Tan-Chr1:115990859 Tan01g5043 Tan-Chr1:115990859 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g5042 K25898 - csv:101213415 1210.28