Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g5043 ATGGCTTTAAATTACTCGAATCATAATGTGTGTGTTCGACATGTTTGCTGTGTAAGAAAAATCATTGGTGCAAGATTTTACGAAAGTTCTGAGAGCGACGGGATACGGTACCACTCACCTCGAGACGAAGCTGGACATGGCACCCACGTGGCTTCAACGGCGGCCGGCAGCGCCGTGGCCAATGCATCCTACTATGGCCTCGCAGCGGGGACGGCCAAGGGCGGCTCCCCCGGCTCAAGGATCGCCATGTACAGAGTCTGCATGCTCGACGGCTGCCGTGGATCGGCCATCATGGCGGCGTTTGACGATGCCATCGCCGATGGGGTCGATTGCTTGTCCTTGTCTCTCGGTACACCCTACTACTTCAGACAGGAACTGAAGAACGACCCTATTGCCATTGGGGCCTTTCATGCAGTTGAGAAGGGGATTGTAGTTGTCTGCTCTGCTGGAAACGACGGCCCCACCACTGAATCCGTGGTCAATGACGCGCCATGGATTTTAACAGTGGCTGCCTCCACCATTGATCGGGTTTTTGAGTCTGATGTTGTGTTGGGCAACAACAAAGTGATCAAGGGAGAAGGTATAAATTTCTCTGCTCTTAAAAAATCCCCTGTATACACACTGATACAAGGCAAGTCAGCCAAGAAAGCGGATGCCAGTGAAGACAGTGCGAGGATTTGTTCTCAAGACTCCATGGACGAAGCTCTGGTGAAGGGGAAGATAGTTATATGCGAAAACAGTGTCGAAGAAGGCGGTTCTGATTGGCAGGGTCAGTCTGAAACAGTGAAGAGTCTTGGAGGGATCGGCCTAGTTTTGATTGATGATCAATCAAAATTAGTTGCAGAGAAGTTTGGTGCTTTTCCCATGACAGCTATTAGCTCAAAGGATGGTGCTGTGCTCCTCTCCTATGTCCAATCAAGCGGGAATCCAGTTGCTACAATCCAACCCACTGTGACCATAATAAACCATAAGCCAGCGCCTGCTATAGCATACTTTTCATCCAGAGGGCCTAATCCCGCAGTACTAAACATAATCAAGCCGGACATATCAGCTCCTGGAGTGAACATTCTTGCAGCGTGGCTTGGCAATGACTCTAACTCTATTCCACAACCAACAAAGTCACCATTCTTCAATGTGATCTCAGGAACTTCAATGTCCTGCCCGCACGTCTCCGGCATAGCAGCCTTCATTAAATCTCAAAACCCCACATGGAGTCCCTCAGCAATCAAGTCAGCCATCATGACAACAGCAATCCAAACTAATAACTTGGGATCGTCGATGACTTGTGATTCGGGGTTGGTAGCCACACCTTATGATTATGGGGCAGGAGAAATATCAACATCTGGAGCATTACAACCAGGACTAGTCTATGAAACTAGTACAACAGACTACTTAGATTACCTTTGCTACCGAGGCTATAACCTGTCCACCATTAAGAGCATTTCAAATACTGTTCCCGAAGGGTTTGATTGCCCCAAGAATTCAACTGAAGACCACATATCCAACATGAACTACCCAACAATAGCAGTGTCCGAATTGACAGACAAGGAAAGCAAGAAAATAAGTAGAACAGTTACAAATGTTGGTGGCGATGGTGAAACAGTTTACACAGTTAGCGTGGACGCACCTGGGGAAGTAGATGTCAAAGTGATCCCGGAGAAATTGGAATTTACAAAGAACAATCAGAAGCAGAGTTACCAAGTGGTGTTCACCTTAACTGCAGGCACACTGAATAAAGTAGTCTTTGGATCAATAACTTGGACCAACGGAAAATATCGAGTCCGGAGTTCATTTGTCGTAACTAGTAACTTATTGACCTAG 1821 47.23 MALNYSNHNVCVRHVCCVRKIIGARFYESSESDGIRYHSPRDEAGHGTHVASTAAGSAVANASYYGLAAGTAKGGSPGSRIAMYRVCMLDGCRGSAIMAAFDDAIADGVDCLSLSLGTPYYFRQELKNDPIAIGAFHAVEKGIVVVCSAGNDGPTTESVVNDAPWILTVAASTIDRVFESDVVLGNNKVIKGEGINFSALKKSPVYTLIQGKSAKKADASEDSARICSQDSMDEALVKGKIVICENSVEEGGSDWQGQSETVKSLGGIGLVLIDDQSKLVAEKFGAFPMTAISSKDGAVLLSYVQSSGNPVATIQPTVTIINHKPAPAIAYFSSRGPNPAVLNIIKPDISAPGVNILAAWLGNDSNSIPQPTKSPFFNVISGTSMSCPHVSGIAAFIKSQNPTWSPSAIKSAIMTTAIQTNNLGSSMTCDSGLVATPYDYGAGEISTSGALQPGLVYETSTTDYLDYLCYRGYNLSTIKSISNTVPEGFDCPKNSTEDHISNMNYPTIAVSELTDKESKKISRTVTNVGGDGETVYTVSVDAPGEVDVKVIPEKLEFTKNNQKQSYQVVFTLTAGTLNKVVFGSITWTNGKYRVRSSFVVTSNLLT 606
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 115990859 115996159 - Tan0021778.2 Tan01g5043 742467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g5043 606 ProSiteProfiles Serine proteases, subtilase domain profile. 1 451 - -
Tan01g5043 606 SUPERFAMILY Subtilisin-like 17 455 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan01g5043 606 FunFam subtilisin-like protease SBT1.5 175 321 - -
Tan01g5043 606 Pfam PA domain 227 299 IPR003137 -
Tan01g5043 606 ProSitePatterns Serine proteases, subtilase family, serine active site. 382 392 IPR023828 -
Tan01g5043 606 PRINTS Subtilisin serine protease family (S8) signature 381 397 IPR015500 -
Tan01g5043 606 PRINTS Subtilisin serine protease family (S8) signature 42 55 IPR015500 -
Tan01g5043 606 Pfam Fibronectin type-III domain 502 600 IPR041469 -
Tan01g5043 606 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 10 597 IPR045051 -
Tan01g5043 606 Pfam Subtilase family 26 421 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Tan01g5043 606 Gene3D Peptidase S8/S53 domain 14 464 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Tan01g5043 606 Gene3D - 468 603 - -
Tan01g5043 606 Gene3D - 175 321 - -
Tan01g5043 606 ProSitePatterns Serine proteases, subtilase family, histidine active site. 46 56 IPR022398 -
Tan01g5043 606 CDD PA_subtilisin_like 181 314 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g5043 Tan-Chr1:115990859 Tan02g2319 Tan-Chr2:91943936 3.00E-134 dispersed
Tan01g5042 Tan-Chr1:115990859 Tan01g5043 Tan-Chr1:115990859 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g5043 K25898 - csv:101213415 947.577