Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g5046 ATGGCTCAAACGACGCCGAATCACACGCAGACGGTCTCCGGTTGGGCAGCACATGATTCTTCCGGCAAGATCACTCCATACACTTTCAAACGCAGAGAAAATGGCCCCGACGACGTGACGATAGAGATTTTGTACTGTGGAATATGCCATACCGATCTTCACTATGCCAAAAACGAGTGGGGTATCACCATGTATCCCGTAGTTCCCGGGCATGAGATGACAGGGGTGGTTTCGAAGGTGGGAAGCAACGTGAAGAAGTTCAAAATAGGGGACAGAGTGGGGGTTGGGTGTATAGCTGCTTCGTGTTTGAACTGTGAGTTCTGCAAAGATTCCCAAGAGAATTACTGTGAAAATTTGCAGTTTACATACAACGGAATCTTCTGGGATGGGAGCATAACATACGGTGGATACTCCAAAATGTTTGTTTCAGATCAGAGGTACGTTGTGCACATACCGGAGAGCCTGCCGATGGACGCGGCAGCGCCGTTGCTGTGCGCTGGGATTACAGTGTTCACGCCCATGAAAGACATGGATCTGATCGACTCGCCGAGGAAGAAGGTCGGAGTGGTGGGTCTTGGTGGGCTTGGCCATATAGCAGTCAAATTTGCAAAGGCGTTCGGCCACCACGTGACTGTCATCAGCACCTCTGCTTCCAAGGAGAAAGAGGCTAAAGGGCGCCTTGGCGCTGACGAGTTCATAATCAGCAAAGATCCTCATCAAATGCAGAGTAATAGGAGGACGTTGGATTTTATATTGGACACAGTATCGGCAGAGCATTGTATTGGATCAATCTTGGAATTGCTGAAAGTAAATGGGACATTGTCCATTGTGGGAGCTCCAGATAAGCCCATTCAATTGCCGTCCTTCCCTTTAATCTTTGGGAAGAGGACTGTGAAGGGAAGCATAATAGGTGGAATACAAGAAACACAAGAGATGATGGATTTATGTGGGAAGCACAACATTACTAGCGATATTGAGGTAGTAAAACCTGAGGACATCAACCATGCTATGGAACGCCTCGCCAAAAACGATGTTCGATACCGATTTGTCATTGACATTGCTCAAAACAAAGCTAAATTTTAA 1083 47.28 MAQTTPNHTQTVSGWAAHDSSGKITPYTFKRRENGPDDVTIEILYCGICHTDLHYAKNEWGITMYPVVPGHEMTGVVSKVGSNVKKFKIGDRVGVGCIAASCLNCEFCKDSQENYCENLQFTYNGIFWDGSITYGGYSKMFVSDQRYVVHIPESLPMDAAAPLLCAGITVFTPMKDMDLIDSPRKKVGVVGLGGLGHIAVKFAKAFGHHVTVISTSASKEKEAKGRLGADEFIISKDPHQMQSNRRTLDFILDTVSAEHCIGSILELLKVNGTLSIVGAPDKPIQLPSFPLIFGKRTVKGSIIGGIQETQEMMDLCGKHNITSDIEVVKPEDINHAMERLAKNDVRYRFVIDIAQNKAKF 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 116044690 116048143 + Tan0008166.1 Tan01g5046 742470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g5046 360 Gene3D - 166 323 - -
Tan01g5046 360 FunFam Cinnamyl alcohol dehydrogenase 166 323 - -
Tan01g5046 360 PANTHER ALDEHYDE REDUCTASE 7 355 IPR047109 GO:0009809(PANTHER)|GO:0016616(PANTHER)|GO:0016616(InterPro)|GO:0045551(PANTHER)
Tan01g5046 360 SUPERFAMILY GroES-like 17 177 IPR011032 -
Tan01g5046 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 321 IPR036291 -
Tan01g5046 360 SMART PKS_ER_names_mod 19 351 IPR020843 GO:0016491(InterPro)
Tan01g5046 360 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Tan01g5046 360 Gene3D - 15 353 - -
Tan01g5046 360 Pfam Alcohol dehydrogenase GroES-like domain 35 153 IPR013154 -
Tan01g5046 360 CDD CAD1 14 352 IPR047109 GO:0016616(InterPro)
Tan01g5046 360 FunFam probable cinnamyl alcohol dehydrogenase 15 181 - -
Tan01g5046 360 Pfam Zinc-binding dehydrogenase 194 316 IPR013149 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g5046 Tan-Chr1:116044690 Tan07g0907 Tan-Chr7:17673509 2.10E-122 dispersed
Tan01g5046 Tan-Chr1:116044690 Tan02g0964 Tan-Chr2:12144033 2.60E-96 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g5046 K00083 - csv:101213170 672.159