Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g5061 ATGCGCCACGACCTAACAAGCAAAGAGAGGGAAAGAAAACGACTAACACAGCAACCGAGAGCGCCAATTTCCTCACCAGCTTCCATCGGTTTTCCTCGCCGTTGTTTCTTCATTCGAGCAATCGGAAATTTGCCGCTCGCTGATCTTTATCGACGACATATATATATATATATCGTTTGTATTCCATTACGGTTTGTTTTGATCTTGTTTTGTGTGGTTCTTGTTTCTCCCATGGCTATGGACGATACTGAAAGCTGTTGTAGTAGACCGGCGGATGACTTTTCGGCTCAGACTTGGAGACAGAAGCAGAAGGTTGGTGTTTACGACGAAGTTCTTCGTCGACTCAGGCTGTCGCACGAGGCAGAGACCAGCGTTCCTGGTTTTGAGGATGAACTTTGGGCTCATTTTCATCGCCTTCCTACTAGGTATGCTATGGACGTCAACGTAGAGAGGGCTCAAGATGTTCTCATGCACAAAAATCTTCTCTACATGGCACATGATCCTGCTACTCGACCTGCAATTGATGTCCGCCTCGTACTGGTTCATTCATCTCCTGGCACAAACTCTGGCAAGTCTGTTCATTCAAACTTGAAGGAAAAAGTGGACCAGCTGTTTTCTGATTATGACAGCAATCAGAGACACCACCCCCCACCAGCATTTGGTTCATCAACAGAGGTCGAATATGGTTTTGAGACCAGCCAATTACATGATATAGATCAGCCTTGCACTTTCTCATGGCCAATGCATGAAATTACAATATCAACAATTGACAAGCCAAAACTACTCAGCCAGTTGACGTCCTTACTTTCTGAGATTGGGCTGAATATTCAAGAAGCGCATGCTTTTTCAACAACAGATGGTTTTTCCTTGGATGTTTTTGTAGTTGATGGTTGGGCAATTGAGGGTACCAAGCAGCTAAAGGATATACTGGCTGAAGAAATATCAAAGATTCAGAAAAGGCATCCTCTATTTACACCTTGGAGCATTTCCCATACTGGGAAGAAAGACAAAATTGGAGTCAAGTTCATCAAGAATTATGTCAACATTCCAAGGGACGAAGTTGATGTGTGGGAAATTGATGCGAGCCTGTTGATCTATGAGAAGAAAATTGCGTCTGGATCTTTTAGTGACTTGTATAAAGGCACTTTTTATGGTCAAGATGTGGCTATTAAGCTTCTAAAAGATGGAAACTTTAATGAGACTGTACGGCGGGAATTTGCTCAAGAAATTCATATCATGAGAAAACTTCGGCATAAGAATGTTGTCCAATTTATTGGTGCATCTACCAGACCTCCAAGCTTTTTTATTGTTACAGAATACATGTCTGGTGGAAGCATGCACGACTTTCTACATCAACGAAAAGGCGTTCTTAGTTTTCCTTCCTTACTAAGAGTGGCAGTTGATGTGTCCAAGGGAATGAACTATTTGCATCAAAAGAATATCATCCATAGAGATCTGAAAGCTGCAAATCTTTTGATGGACGAAGATGGGGTTGTCAAGGTAGCTGATTTTGGTGTTGCCAGAGTGCAAGCTCAATCTGGTGTGATGACTGCAGAAACTGGAACATATCGTTGGATGGCTCCAGAGGTTATTGAGCACAAACCATATGATCATAAAGCTGATGTTTATAGCTTTGGGATAGTGTTGTGGGAGCTGCTTACAGGACAGCTTCCTTACGATAACCTGTCTCCGTTGCAAGCAGCAATAGGCGTGGTCCAGAAGGGTCTGAGGCCTAAGATTCCGAGGCATGCTCATCCAATGATCGTGGACTTGCTTGAGAGATGCTGGCGGCAGGATCCATCTTTGAGGCCTGAATTTTCTGAAATTACAAAACTTTTGCAGCAGATGCTGAAGGAGAGTGGCAGGAATCATCTGGAAGACCATCAAAATTTTGGGCAGGAGCAGAGCGTTCTAGGGCGGAGTGAGGATACGGTTCCTAACTACATGCAATTATCTATCCATATGCTGTGA 1971 43.48 MRHDLTSKERERKRLTQQPRAPISSPASIGFPRRCFFIRAIGNLPLADLYRRHIYIYIVCIPLRFVLILFCVVLVSPMAMDDTESCCSRPADDFSAQTWRQKQKVGVYDEVLRRLRLSHEAETSVPGFEDELWAHFHRLPTRYAMDVNVERAQDVLMHKNLLYMAHDPATRPAIDVRLVLVHSSPGTNSGKSVHSNLKEKVDQLFSDYDSNQRHHPPPAFGSSTEVEYGFETSQLHDIDQPCTFSWPMHEITISTIDKPKLLSQLTSLLSEIGLNIQEAHAFSTTDGFSLDVFVVDGWAIEGTKQLKDILAEEISKIQKRHPLFTPWSISHTGKKDKIGVKFIKNYVNIPRDEVDVWEIDASLLIYEKKIASGSFSDLYKGTFYGQDVAIKLLKDGNFNETVRREFAQEIHIMRKLRHKNVVQFIGASTRPPSFFIVTEYMSGGSMHDFLHQRKGVLSFPSLLRVAVDVSKGMNYLHQKNIIHRDLKAANLLMDEDGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVYSFGIVLWELLTGQLPYDNLSPLQAAIGVVQKGLRPKIPRHAHPMIVDLLERCWRQDPSLRPEFSEITKLLQQMLKESGRNHLEDHQNFGQEQSVLGRSEDTVPNYMQLSIHML 656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 116150886 116158592 + Tan0016650.1 Tan01g5061 742485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g5061 656 PANTHER SERINE-THREONINE PROTEIN KINASE 225 617 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Tan01g5061 656 Gene3D - 248 321 - -
Tan01g5061 656 Gene3D Phosphorylase Kinase; domain 1 357 442 - -
Tan01g5061 656 SMART serkin_6 364 617 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g5061 656 MobiDBLite consensus disorder prediction 1 26 - -
Tan01g5061 656 FunFam Serine/threonine-protein kinase isoform 1 353 442 - -
Tan01g5061 656 CDD STKc_MAP3K-like 370 613 - -
Tan01g5061 656 SUPERFAMILY Protein kinase-like (PK-like) 346 612 IPR011009 -
Tan01g5061 656 PRINTS Tyrosine kinase catalytic domain signature 475 493 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g5061 656 PRINTS Tyrosine kinase catalytic domain signature 540 562 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g5061 656 PRINTS Tyrosine kinase catalytic domain signature 584 606 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g5061 656 PRINTS Tyrosine kinase catalytic domain signature 438 451 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g5061 656 PRINTS Tyrosine kinase catalytic domain signature 521 531 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g5061 656 ProSiteProfiles Protein kinase domain profile. 364 617 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g5061 656 SUPERFAMILY ACT-like 248 314 IPR045865 -
Tan01g5061 656 ProSiteProfiles ACT domain profile. 250 327 IPR002912 -
Tan01g5061 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g5061 656 MobiDBLite consensus disorder prediction 1 17 - -
Tan01g5061 656 Pfam Protein tyrosine and serine/threonine kinase 366 612 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g5061 656 Gene3D Transferase(Phosphotransferase) domain 1 443 650 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3462 Tan-Chr1:99935321 Tan01g5061 Tan-Chr1:116150886 1.30E-46 dispersed
Tan01g5061 Tan-Chr1:116150886 Tan02g0641 Tan-Chr2:5896324 5.00E-191 dispersed
Tan10g0174 Tan-Chr10:1797450 Tan01g5061 Tan-Chr1:116150886 4.10E-26 dispersed
Tan10g0575 Tan-Chr10:4675685 Tan01g5061 Tan-Chr1:116150886 7.90E-35 dispersed
Tan01g5061 Tan-Chr1:116150886 Tan03g2260 Tan-Chr3:76884458 7.20E-65 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67156 PF07714 PK_Tyr_Ser-Thr 5.30E-73 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g5061 - - - 0.0