Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g5110 ATGAGCTGTTTTTCTTGCATTGGTACTCGTTGTAAAGACACCAGGAAGGTCGAAATTGACAATGAAACTGGAAAGGGGAAGAAATCACAAACCAGAAGTGGAAATGACTGGAAATGTGGGGCTGCACAAAGCTTCCCATTTCGTGAACTAGCCACGGCGACAAGAGGTTTCAAGGAAGTGAACTTGATTGGTGAAGGGGGTTTTGGAAGAGTTTACAAAGGCCGATTAGAATCAGGCCAGGTAGTTGCGATTAAACAACTCAATCATGACGGTCTTCAAGGATTTCAGGAATTCATCGTTGAAGTTCTCATGTTAAGCTTATTGCATCACTGTAATCTTGTCACATTGATCGGTTATTGTACTGATGGAGATCAAAGACTGTTGGTCTACGAGTATATGTCGATGGGAAGCTTGGAAAACCATCTTTTTGGTTTGTCCCTCGAACGACCGCCATTGAGTTGGAACACTCGAATAAAGATTGCTCTTGGTGCAGCCCGGGGCCTTGAGTATCTTCACTGCACAACCAATCCACCAGTCATCTATCGTGACTTGAAATCTGCAAATATATTACTGGACGATGACTTCAATCCAAAGCTCTCGGATTTTGGACTGGCAAAGTTAGGACCGGTCGGTGACAACACTCATGTTTCCACAAGAGTGATGGGAACATATGGTTATTGTGCTCCCGAGTATGCCATGAGTGGTAAACTGACTCTTAAATCTGATATCTATTGCTTTGGTGTGGTTCTCTTGGAGATAATTACAGGTAGGAAAGCTATAGACTCCACCAAAAAACCTGGAGAGCAAAATCTGGTTGCTTGGTCTCGCCCATTTCTAAAAGATCGGAGGAAGTTCGTTCAATTAGTCGACCCACTGCTCGAAGGACGCTACCCTCTTCGTTGTCTACACCATGCAATTGCAATCACTGCAATGTGTCTCCAGGAGCAGCCAACGTTCCGACCAATTATCAGTGATATCGTCGTGGCTCTTGAGTACTTAGTTTCTCAAAGTTACGCATCAGAACAACCGAGGGACGAAGCGGCTAGTCCCTCCAAACGATCTCCGCAAAAGGACAGGAGTGCCCATGTTCAAGAATCAAGATATGGAAAGAGTTCAACATCCAAGTAA 1128 44.5 MSCFSCIGTRCKDTRKVEIDNETGKGKKSQTRSGNDWKCGAAQSFPFRELATATRGFKEVNLIGEGGFGRVYKGRLESGQVVAIKQLNHDGLQGFQEFIVEVLMLSLLHHCNLVTLIGYCTDGDQRLLVYEYMSMGSLENHLFGLSLERPPLSWNTRIKIALGAARGLEYLHCTTNPPVIYRDLKSANILLDDDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYCFGVVLLEIITGRKAIDSTKKPGEQNLVAWSRPFLKDRRKFVQLVDPLLEGRYPLRCLHHAIAITAMCLQEQPTFRPIISDIVVALEYLVSQSYASEQPRDEAASPSKRSPQKDRSAHVQESRYGKSSTSK 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 116495196 116499420 - Tan0000792.1 Tan01g5110 742534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g5110 375 ProSiteProfiles Protein kinase domain profile. 57 333 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g5110 375 PANTHER OS07G0668900 PROTEIN 27 354 - -
Tan01g5110 375 MobiDBLite consensus disorder prediction 346 365 - -
Tan01g5110 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan01g5110 375 CDD STKc_IRAK 63 331 - -
Tan01g5110 375 Gene3D Transferase(Phosphotransferase) domain 1 133 356 - -
Tan01g5110 375 SUPERFAMILY Protein kinase-like (PK-like) 39 331 IPR011009 -
Tan01g5110 375 FunFam Serine/threonine-protein kinase PBS1 133 348 - -
Tan01g5110 375 Gene3D Phosphorylase Kinase; domain 1 27 132 - -
Tan01g5110 375 SMART serkin_6 57 333 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan01g5110 375 PIRSF ILK 9 349 - -
Tan01g5110 375 ProSitePatterns Protein kinases ATP-binding region signature. 63 85 IPR017441 GO:0005524(InterPro)
Tan01g5110 375 MobiDBLite consensus disorder prediction 340 375 - -
Tan01g5110 375 FunFam probable serine/threonine-protein kinase RLCKVII 27 132 - -
Tan01g5110 375 Pfam Protein kinase domain 58 326 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g5110 Tan-Chr1:116495196 Tan02g1503 Tan-Chr2:64392830 3.50E-165 dispersed
Tan01g5110 Tan-Chr1:116495196 Tan01g5111 Tan-Chr1:116495848 1.90E-219 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67158 PF00069 Pkinase 3.70E-44 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g5110 - - - 0.0