Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g5129 ATGGCTACGGGTATAGATTTTTCACCTCCCTTTGCCCTACTAGAAGGCGGCGGGTATAATAAGGACAATGTATCAGCCACGAATGACGAAAGTTCTGATAGTTTTAATAGTTTGAAACAGATGACCACTGGGAAACCTCCCCGACACCTCTCGGTTATGCGGCATAGTGTGAGCTCCATAAAGCTGCTAGGCCAAGCTGATTTAAGCTTGGATGCTGATGCTCTTGGGAATAAGTCGCCTGATGGGAAAGCAGGATTCTTACCTGTCTTCAGATCGGGTAGCTGTTCAGAAAGGGGACCTAAACAGTACATGGAAGATGAGCACATATGCATAGATGATCTTGTTGAACACATCCATGCTTGTGCAGATTTCACTTCTCCTGGAGCTTTCTATGGTGTATTTGATGGCCATGGGGGTTCAGATGCAGCGGCTTTTGTTAGAAATAACATCCTCAGGTTCATAGTCGAGGACTCCTGTTTTCCAATTAGTGTAGAGAAGGCAATTAAGAGTGCTTTTTTGAAAGCTGATTACGCATTTGCTGATGCTAGTTCCCTGGACATCTCATCTGGCACAACTGCTCTAACTGCTTTCATTTTTGGCAGAACAATGATTATTGCAAATGCGGGAGATTGTCGAGCTGTTCTGGGGAGGAGGGGCAAGGCAATTGAGGTGTCGAAGGATCACAAGCCTAACTGTGCATCTGAGAAACTCAGAATTGAGAAGCTGGGTGGAGTGATTTATGATGGGTACCTAAATGGGCAGTTATCTGTTGCGCGTGCTATAGGAGACTGGCACATGAAAGGTGCAAAGGGTTCTGCATGCCCACTGAGTGCAGAGCCAGAGTTGCAGGAATTGCATTTGACGGAGGAAGATGAATTTCTAATTATGGGCTGCGATGGGCTTTGGGATGTGATGAGCAGTCAGTATGCTGTAACAATGGCAAGGAAAGAGCTGATGCTACATAATGATCCTGAAAGATGTTCAAGAGAGCTGGTAAGAGAGGCGCTAAAGCGCAATACATGCGATAATTTAACCGTGATTGTGATATGTTTTTCGGCTGATCCACCCCCTCGGATAGAAATTCCTCCAACTCGAGTAAGGCGAAGCATATCATTAGAAGGGCTGAATTTGTTGAAAGGTGTACTGGACTGCAATTCATGA 1161 45.39 MATGIDFSPPFALLEGGGYNKDNVSATNDESSDSFNSLKQMTTGKPPRHLSVMRHSVSSIKLLGQADLSLDADALGNKSPDGKAGFLPVFRSGSCSERGPKQYMEDEHICIDDLVEHIHACADFTSPGAFYGVFDGHGGSDAAAFVRNNILRFIVEDSCFPISVEKAIKSAFLKADYAFADASSLDISSGTTALTAFIFGRTMIIANAGDCRAVLGRRGKAIEVSKDHKPNCASEKLRIEKLGGVIYDGYLNGQLSVARAIGDWHMKGAKGSACPLSAEPELQELHLTEEDEFLIMGCDGLWDVMSSQYAVTMARKELMLHNDPERCSRELVREALKRNTCDNLTVIVICFSADPPPRIEIPPTRVRRSISLEGLNLLKGVLDCNS 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 116626684 116630782 - Tan0008900.1 Tan01g5129 742553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g5129 386 ProSitePatterns PPM-type phosphatase domain signature. 130 138 IPR000222 GO:0043169(InterPro)
Tan01g5129 386 MobiDBLite consensus disorder prediction 23 44 - -
Tan01g5129 386 SUPERFAMILY PP2C-like 85 352 IPR036457 -
Tan01g5129 386 ProSiteProfiles PPM-type phosphatase domain profile. 91 351 IPR001932 -
Tan01g5129 386 MobiDBLite consensus disorder prediction 23 48 - -
Tan01g5129 386 FunFam Probable protein phosphatase 2C 22 76 354 - -
Tan01g5129 386 SMART PP2C_SIG_2 106 351 IPR001932 -
Tan01g5129 386 SMART PP2C_4 81 349 IPR001932 -
Tan01g5129 386 Gene3D - 78 354 IPR036457 -
Tan01g5129 386 Pfam Protein phosphatase 2C 92 343 IPR001932 -
Tan01g5129 386 PANTHER PROTEIN PHOSPHATASE 2C 68 351 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Tan01g5129 386 CDD PP2Cc 90 351 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g5129 Tan-Chr1:116626684 Tan08g0349 Tan-Chr8:3108855 1.60E-88 dispersed
Tan01g5129 Tan-Chr1:116626684 Tan04g0366 Tan-Chr4:3060605 8.10E-16 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g5129 K14803 - csv:101205355 754.977