Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g5152 ATGGGGCTCAAAGTCCTTTCCGCTCTCGACACTGCCAAAACCCAATTGTACCATTTCAAGGCCATCGTCATCGCCGGGATGGGGCTCTTCACCGACGCCTACGACCTCTTCAGCATCACTCCGATTATGACCCTCGTTGGACGTGTGTACTACCAGGACCAACAGAACGAGACTCCGGCCACCGTCAAATCCGCTATGTTGGCGGTGGCCCTTCTCGGGACGGCGACGGGTCAACTGGTGTTCGGCATACTCGGCGACCGAGTGGGACGGCGGCGCGTGTACGGACTCGCATTGGCGCTGATGGTGCTGAGTTCAATCGGATGTGGATTCTCAATCTGCACCACACGAAGCTGCGTCCTTGTGAGCCTAGGGTTCTTCAGATTCCTTCTGGGACTGGGAATTGGAGGAGATTACCCATTGTCGGCAACCATAATGTCGGAGTTCGCGAACAAGAAGACACGTGGAGCGTTCATAGCGGCGGTGTTCTCGATGCAGGGATTTGGGATCTTGGCCAGCTCCACCGTGACGATGATCGTGTGTTCCATATTCGATCGGGCCTCAAATTACCCACCCAATAATCGTACGCCCATGGGAGCGGATATTGCCTGGAGATTGATTCTCATGCTCGGCGCTTTTCCGGCGGCGATGACTTATTACTGGCGGATGATGATGCCGGAAACCGCCAGATACACAGCTCTGGTAGAGCGAAATGTGGCACAAGCAGCAAAGGACATGGAGAAAGTGTTGGATGTGTCATTGGTTGATATCATAGAAGACAGCCCTCTGTCCCCTTCCACCCCAAATTTCTCCTTATTTTCTAACGAATTTGTTCGTCGCCATGGCCGTGACCTCTTTTCCTGCGCCACGGCTTGGTTTCTCGTTGACATTGTATTCTACAGCAGCAACCTCTTCCAATCCAAAATCTACACTCAATTCCTCCGCCCCAAACAAAACGTCAACGTTTACCGTGACGCCTTCAACGAAGCCAAACTCCAAGCCATCGTCGCTGTCTGTTCCACCATTCCGGGCTACTGGGTCTCCGTCTATTTCATCGACCGATTGGGGCGAGTCAGAATCCAAATGATGGGATTCTTCTTCATGGCCATTGGCTATCTGGCCATCGCCATTCCCTATGACAGATATTGGGCTTTTAATAACCACAAAATTGGTTTCATGATAATCTATTGCCTCACATTTTTCTTCTCAAACTTCGGCCCCAATACCACCACTTTCATTCTCCCCGCCGAGCTCTTCCCAGCCAGATTCAGATCCACCTGCCATGGAATCTCGGGAGCCGCCGGGAAGATCGGCGCGATCATCGGCGCCGTCGGGTTCTTATGGGCCTCACACGACCGGAAAGAGAATGGAATTGGGTTGAAGGCGTCGCTGATGATTCTTGGCGGGGTGAGTATGGTGGGAATGGCGGTCACGTATTTCTTCACCAGAGAAACCACGGGAAGGTCGTTGGAAGAGAATGAGAACGAAGACGAATATTCTGGGGTTTGCTTTCTTAGGTGTTTTCGCCACAAACCTGCTTGCTCCCTTCCGTCTATTACTGAAGATGACGACATGTCGTCACGTTCTAACTCCATTCAAACTCAAAGTAGTAGACCAATTCGTTAG 1623 51.88 MGLKVLSALDTAKTQLYHFKAIVIAGMGLFTDAYDLFSITPIMTLVGRVYYQDQQNETPATVKSAMLAVALLGTATGQLVFGILGDRVGRRRVYGLALALMVLSSIGCGFSICTTRSCVLVSLGFFRFLLGLGIGGDYPLSATIMSEFANKKTRGAFIAAVFSMQGFGILASSTVTMIVCSIFDRASNYPPNNRTPMGADIAWRLILMLGAFPAAMTYYWRMMMPETARYTALVERNVAQAAKDMEKVLDVSLVDIIEDSPLSPSTPNFSLFSNEFVRRHGRDLFSCATAWFLVDIVFYSSNLFQSKIYTQFLRPKQNVNVYRDAFNEAKLQAIVAVCSTIPGYWVSVYFIDRLGRVRIQMMGFFFMAIGYLAIAIPYDRYWAFNNHKIGFMIIYCLTFFFSNFGPNTTTFILPAELFPARFRSTCHGISGAAGKIGAIIGAVGFLWASHDRKENGIGLKASLMILGGVSMVGMAVTYFFTRETTGRSLEENENEDEYSGVCFLRCFRHKPACSLPSITEDDDMSSRSNSIQTQSSRPIR 540
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 116696426 116698626 - Tan0003864.1 Tan01g5152 742576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g5152 540 SUPERFAMILY MFS general substrate transporter 9 495 IPR036259 -
Tan01g5152 540 ProSitePatterns Sugar transport proteins signature 2. 129 154 IPR005829 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Tan01g5152 540 FunFam Inorganic phosphate transporter 1-6 17 501 - -
Tan01g5152 540 CDD MFS_PhT 22 484 - -
Tan01g5152 540 Gene3D MFS general substrate transporter like domains 17 502 IPR036259 -
Tan01g5152 540 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 6 492 - -
Tan01g5152 540 MobiDBLite consensus disorder prediction 518 540 - -
Tan01g5152 540 MobiDBLite consensus disorder prediction 519 540 - -
Tan01g5152 540 Pfam Sugar (and other) transporter 23 493 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Tan01g5152 540 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 485 IPR020846 GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g5152 Tan-Chr1:116696426 Tan10g0685 Tan-Chr10:5556828 1.60E-147 dispersed
Tan01g5152 Tan-Chr1:116696426 Tan07g2221 Tan-Chr7:73629893 7.30E-148 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g5152 K08176 - csv:101218554 877.47