Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g5155 | ATGTCGGGATCTGAGACCGGAGTGATGACCAGCGGCGAACCCTTCTCCATCGGTCTCCAGAAGAGTCCAGTACAGTCACAGCAGCCAGTCTTGCAGGGCATGCATTTACCCTTCGGCGCCGACGGCGTCTACAAGCCCGTCGCCGCCGCCTCGCCCACCTACCAATCCTCCGGCGTCGGAGTTGCTGGCAATGCCGGTTCCGATGTATCAGCTTTCGTTAACATGAATACGCAAAGCGAGCCAGTAAAGAGGAAGAGAGGGAGACCTAGGAAGTATGGGCCAGATGGCAGTATGGCAATGGTTCCTGCAGTCCCCTCCGCCGCCGCAACTCAGTCAAGTGGAGGTTTTTCTCCTCCACCCACCGCCGCCCCTCCGTCGGGAGGATCAGCCTCTCCAACTTCTTTGAAGAAAGCAAGAGGCAGACCCCCTGGCTCTAGCAAAAAGCAGCAGTTGGATGCTTTGGGGTCAGCAGGAATTGGGTTTACCCCACATGTCATCACCGTGAAAGCTGGAGAGGATGTATCTTCGAAAATAATGTCATTTTCACAGAATGGTCCTAGAGCTGTATGTATCCTTACAGCAAATGGAGCAATATCCAATGTGACACTACGTCAACCAGCCATGTCAGGTGGAACTGTGACTTATGAGGGGCGATTCGAGCTTTTGTCACTATCTGGGTCGTATCTCCTCTCCGAGAATGGCGGTCAGCGGAGCCGAACTGGGGGGCTAAGTGTTTCATTGTCTGGACCAGATGGTAGAGTCTTAGGTGGTGGGGTGGCTGGTCTTCTAACGGCAGCCTCTCCTGTTCAGGTGGTGGTGGGGAGCTTCGTCGCCGATGTGGGGCATAATGAATTGAAACAAGCAAACCATATAGAACAGCAGCCTGTTACTGCACCACATAAACTTGCTCCGATCCGTGCTGGGATGGCGGGGGCGAGCAGTCCGCAATCACGTGGAACTCTCAGTGAATCCTCGGGAGGGCCAGGGAGTCCGTTTAATCAGAGTGCTGGAGCCTGCAATAACACCATATCTTGGAAGTGA | 1041 | 54.37 | MSGSETGVMTSGEPFSIGLQKSPVQSQQPVLQGMHLPFGADGVYKPVAAASPTYQSSGVGVAGNAGSDVSAFVNMNTQSEPVKRKRGRPRKYGPDGSMAMVPAVPSAAATQSSGGFSPPPTAAPPSGGSASPTSLKKARGRPPGSSKKQQLDALGSAGIGFTPHVITVKAGEDVSSKIMSFSQNGPRAVCILTANGAISNVTLRQPAMSGGTVTYEGRFELLSLSGSYLLSENGGQRSRTGGLSVSLSGPDGRVLGGGVAGLLTAASPVQVVVGSFVADVGHNELKQANHIEQQPVTAPHKLAPIRAGMAGASSPQSRGTLSESSGGPGSPFNQSAGACNNTISWK | 346 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 116716138 | 116718761 | - | Tan0004523.1 | Tan01g5155 | 742579 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g5155 | 346 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 53 | 331 | IPR039605 | GO:0003680(InterPro) | |
Tan01g5155 | 346 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 161 | 284 | - | - | |
Tan01g5155 | 346 | FunFam | AT-hook motif nuclear-localized protein 1-like | 163 | 294 | - | - | |
Tan01g5155 | 346 | CDD | DUF296 | 162 | 276 | IPR005175 | - | |
Tan01g5155 | 346 | SMART | AT_hook_2 | 83 | 95 | IPR017956 | GO:0003677(InterPro) | |
Tan01g5155 | 346 | SMART | AT_hook_2 | 136 | 148 | IPR017956 | GO:0003677(InterPro) | |
Tan01g5155 | 346 | Gene3D | - | 163 | 294 | - | - | |
Tan01g5155 | 346 | MobiDBLite | consensus disorder prediction | 309 | 346 | - | - | |
Tan01g5155 | 346 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Tan01g5155 | 346 | MobiDBLite | consensus disorder prediction | 313 | 346 | - | - | |
Tan01g5155 | 346 | ProSiteProfiles | PPC domain profile profile. | 157 | 297 | IPR005175 | - | |
Tan01g5155 | 346 | MobiDBLite | consensus disorder prediction | 75 | 150 | - | - | |
Tan01g5155 | 346 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 163 | 277 | IPR005175 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g2760 | Tan-Chr1:50275909 | Tan01g5155 | Tan-Chr1:116716138 | 9.10E-102 | dispersed | |
Tan01g2761 | Tan-Chr1:50275909 | Tan01g5155 | Tan-Chr1:116716138 | 9.10E-102 | dispersed | |
Tan01g5155 | Tan-Chr1:116716138 | Tan06g2054 | Tan-Chr6:66875193 | 8.80E-62 | dispersed | |
Tan01g5155 | Tan-Chr1:116716138 | Tan07g1762 | Tan-Chr7:69191597 | 9.40E-56 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g5155 | - | - | - | 0.0 |