Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan01g5169 | ATGAAAATGGCAGGGTACAGCGAAGGAGGAGGATCAGCTTCACGCTACGTTCATCATCAACAACAACTTCTGAATCCGGAATTGCACCTGGACACTACTACTACTACTACTACTCCATCTAATTCCTCTATTCCGTTTCATCATCATCCATTCAACCATTCTAATAATCATTCTAATTCCAAGCTCCATGACGATGTTCATAACAATAACAATAATAATCCAGACTCTTCTCTGCGCCGCCCTCGTGGCCGTCCTCCTGGTTCCAAGAACAAGCCCAAGCCTCCTATTATCGTCACTCGCGACAGCCCCAACGTCCTTGGATCTCATGTCCTCGAGGTCTCCGCCTCCGCCGATATCGTTGACAGTCTCTCCAATTACGCCCGCCGGAGGGGCAGAGGAGTCAGCATTCTCTCCGGCACCGGCACCGTCGCCAACGTCACTCTCCGTCAGCCTGCCTCTCCGCCCGGGAGTGTGATTACTCTTCATGGCAGGTTCGAGATTCTGTCGCTCACTGGCACCGTGCTTCCCCCGCCGGCTCCGCCGCAGGCTGGGGGGCTGTCCATATTCCTCGCCGGTGCACAGGGCCAGGTGGTAGGAGGGACGGTGGTGGGGCCCTTGGTGGCATCGGGGGCGGTGATTTTGATGGCGGCGTCGTTTTCGAACGCGGTGTTTGAGCGGTTGCCTTTGGAAGAATTAGAAGAGGAAGGGGGCGGAGTGCAAGTAGTTCAGCCAACGGCGTCGCAGTCGTCAGGGGTCACCGGAGGAGGAGGACAGATGGGGGAGGGCGGTGGAGGCAGTGGGAATGCAAATGAAGGAGGCGGCGGAGGAGGAGGAATTCCGTTCATAGGTATGGGAGGATATCCATTTGCGGGAGATTTGTTTGGTTGGGGAAGTGGAAGTGCAGGAAAGCCTCGTGAATTTTAA | 924 | 55.52 | MKMAGYSEGGGSASRYVHHQQQLLNPELHLDTTTTTTTPSNSSIPFHHHPFNHSNNHSNSKLHDDVHNNNNNNPDSSLRRPRGRPPGSKNKPKPPIIVTRDSPNVLGSHVLEVSASADIVDSLSNYARRRGRGVSILSGTGTVANVTLRQPASPPGSVITLHGRFEILSLTGTVLPPPAPPQAGGLSIFLAGAQGQVVGGTVVGPLVASGAVILMAASFSNAVFERLPLEELEEEGGGVQVVQPTASQSSGVTGGGGQMGEGGGGSGNANEGGGGGGGIPFIGMGGYPFAGDLFGWGSGSAGKPREF | 307 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 116753349 | 116755590 | - | Tan0006447.2 | Tan01g5169 | 742593 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan01g5169 | 307 | ProSiteProfiles | PPC domain profile profile. | 103 | 243 | IPR005175 | - | |
Tan01g5169 | 307 | MobiDBLite | consensus disorder prediction | 245 | 274 | - | - | |
Tan01g5169 | 307 | FunFam | AT-hook motif nuclear-localized protein | 106 | 235 | - | - | |
Tan01g5169 | 307 | MobiDBLite | consensus disorder prediction | 31 | 57 | - | - | |
Tan01g5169 | 307 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 43 | 262 | IPR014476 | GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0010228(PANTHER) | |
Tan01g5169 | 307 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 105 | 233 | - | - | |
Tan01g5169 | 307 | Gene3D | - | 108 | 235 | - | - | |
Tan01g5169 | 307 | CDD | DUF296 | 109 | 193 | IPR005175 | - | |
Tan01g5169 | 307 | PIRSF | ESCAROLA | 28 | 307 | IPR014476 | GO:0003680(InterPro) | |
Tan01g5169 | 307 | MobiDBLite | consensus disorder prediction | 31 | 101 | - | - | |
Tan01g5169 | 307 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 108 | 220 | IPR005175 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g5169 | Tan-Chr1:116753349 | Tan06g2152 | Tan-Chr6:71260477 | 1.50E-60 | dispersed | |
Tan01g5168 | Tan-Chr1:116753349 | Tan01g5169 | Tan-Chr1:116753349 | 1.70E-128 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan01g5169 | - | - | - | 0.0 |