Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g5170 ATGGCGATGAAGGGTAAAGTTTGTGTAACAGGGGGTGGCGGGTTTATTGGTTCGTGGGTCGTCAAGCTTCTTCTATCCAGGGATTATATTGTCCACGGAACTGTCCGGGAACCCAGCGATGCCAAATATGATCACTTGAGAAAACTTGAGAAAGGGAGCGAGAATCTGAAACTGTTTAAAGCTGATTTACTGGACTATGAGTCTCTGCGTACTGCGATTGCGGGATGTGATGGAGTTTTCCATGTTGCTAGTCCAGTTCCTTCCACAACTTCATCAAACCCTGAGACAGAAGTGCTTGAACCTGCTATAAAGGGTACACTTAATGTGCTTGAAGCGTGCGCCGAAGCAAAAGTCAAGCGAGTAGTTGTAGTATCCTCTGTTGCTGCAGTGTGTTTCAATCCAAGTTGGCCTCAAGGTCAAGTAATGGATGAAAGTTGTTGGTCTGATAAGGAGTACTGTAGAGCTACCAAGAACTGGTATTTTCTATCGAAAACAGAAGCTGAAAGTGAAGCCTTGGAGTTTGGTAGAAAACATGGGCTTGACGTTGTGACTATTTGTCCTACCCTTGTTATCGGGCCGATTTTGCAGCCAACAATCAACTCCAGCAGCTTGGTTCTTCTTAGAATTCTTAAAGAAGGATGCGAGTCGATGGAAAACAGGGTACGAATGCTCGTAGATGTACGAGATGTAGCAGAGGCGCTACTTCTTTTATATGAGAAGGCAGAGGCAGAAGGAAGGTACAATTGTACAGCGCATAGAATGGAGACGAGGGAGCTGGTGGATGTATTGAGGAGCAAGTACCCTGATTATAGCTATCCAAAGAAGTTGAGCGATGGGAACGAGGAGTCGATAAGTTTAAGCTCGGAGAAGCTGCAAAGTTTGGGTTGGAAGTATCGGGCATTGGAGGAGACGCTTGCGGATGCTATCCAGAGTTTCAAAGATGCGGGCATGCTGGACTGA 960 46.04 MAMKGKVCVTGGGGFIGSWVVKLLLSRDYIVHGTVREPSDAKYDHLRKLEKGSENLKLFKADLLDYESLRTAIAGCDGVFHVASPVPSTTSSNPETEVLEPAIKGTLNVLEACAEAKVKRVVVVSSVAAVCFNPSWPQGQVMDESCWSDKEYCRATKNWYFLSKTEAESEALEFGRKHGLDVVTICPTLVIGPILQPTINSSSLVLLRILKEGCESMENRVRMLVDVRDVAEALLLLYEKAEAEGRYNCTAHRMETRELVDVLRSKYPDYSYPKKLSDGNEESISLSSEKLQSLGWKYRALEETLADAIQSFKDAGMLD 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 116765397 116770158 + Tan0006192.1 Tan01g5170 742594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g5170 319 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 310 IPR050425 GO:0016616(PANTHER)
Tan01g5170 319 Gene3D - 2 319 - -
Tan01g5170 319 Pfam NAD dependent epimerase/dehydratase family 7 248 IPR001509 -
Tan01g5170 319 FunFam NAD(P)-binding Rossmann-fold superfamily protein 1 319 - -
Tan01g5170 319 CDD FR_SDR_e 7 296 - -
Tan01g5170 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 313 IPR036291 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g5170 Tan-Chr1:116765397 Tan06g0468 Tan-Chr6:3411935 7.30E-79 dispersed
Tan01g5170 Tan-Chr1:116765397 Tan01g5171 Tan-Chr1:116765397 4.70E-118 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g5170 - - - 0.0