Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan01g5171 ATGGCGATGAAGGGTAAAGTTTGTGTAACAGGGGGTGGCGGGTTTATTGGTTCGTGGGTCGTCAAGCTTCTTCTATCCAGGGATTATATTGTCCACGGAACTGTCCGGGAACCCAGCGATGCCAAATATGATCACTTGAGAAAACTTGAGAAAGGGAGCGAGAATCTGAAACTGTTTAAAGCTGATTTACTGGACTATGAGTCTCTGCGTACTGCGATTGCGGGATGTGATGGAGTTTTCCATGTTGCTAGTCCAGTTCCTTCCACAACTTCATCAAACCCTGAGACAGAAGTGCTTGAACCTGCTATAAAGGGTACACTTAATGTGCTTGAAGCGTGCGCCGAAGCAAAAGTCAAGCGAGTAGTTGTAGTATCCTCTGTTGCTGCAGTGTGTTTCAATCCAAGTTGGCCTCAAGGTCAAGTAATGGATGAAAGTTGTTGGTCTGATAAGGAGTACTGTAGAGCTACCAAGAACTGGTATTTTCTATCGAAAACAGAAGCTGAAAGTGAAGCCTTGGAGTTTGGTAGAAAACATGGGCTTGACGTTGTGACTATTTGTCCTACCCTTGTTATCGGGCCGATTTTGCAGCCAACAATCAACTCCAGCAGCTTGGTTCTTCTTAGAATTCTTAAAGGTACTCGTTTGTGTCACATTTGTGTGCAAGCACAATATTCATTTGATATCTCCTCATTTCAACCGAGCAACATTGAAAAGTCATCTTCAAGTAAAGAAAATATTACAAATTGTGGATGA 753 43.03 MAMKGKVCVTGGGGFIGSWVVKLLLSRDYIVHGTVREPSDAKYDHLRKLEKGSENLKLFKADLLDYESLRTAIAGCDGVFHVASPVPSTTSSNPETEVLEPAIKGTLNVLEACAEAKVKRVVVVSSVAAVCFNPSWPQGQVMDESCWSDKEYCRATKNWYFLSKTEAESEALEFGRKHGLDVVTICPTLVIGPILQPTINSSSLVLLRILKGTRLCHICVQAQYSFDISSFQPSNIEKSSSSKENITNCG 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 116765397 116770158 + Tan0006192.2 Tan01g5171 742595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan01g5171 250 CDD FR_SDR_e 7 214 - -
Tan01g5171 250 FunFam Dihydroflavonol reductase 4 231 - -
Tan01g5171 250 Gene3D - 2 226 - -
Tan01g5171 250 Pfam NAD dependent epimerase/dehydratase family 7 202 IPR001509 -
Tan01g5171 250 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 215 IPR036291 -
Tan01g5171 250 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 209 IPR050425 GO:0016616(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g5171 Tan-Chr1:116765397 Tan06g0468 Tan-Chr6:3411935 3.00E-59 dispersed
Tan01g5170 Tan-Chr1:116765397 Tan01g5171 Tan-Chr1:116765397 4.70E-118 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan01g5171 - - - 0.0