Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0014 ATGTTCCATCCGAAGAAAGCGTCGAGTAATATGAATAATTCTCATGAGAGAGCAGCAGCTGGGATGTGCGTTCAAGGCGACTCCGGCCTCGTCCTCACCACCGACCCCAAGCCCCGCCTCCGTTGGACTGTCGAGCTTCATGAGCGCTTCGTCGATGCTGTCACTCAGCTCGGAGGCCCTGATAAGGCCACCCCAAAAACCATCATGAGAGTTATGGGTGTAAAAGGTCTTACTCTTTACCACCTCAAGAGCCATCTCCAGAAATTTAGACTGGGAAAGCAGCCTCACAAGGAATTCAATGATCACTCAATTAAGGATGGTATGAGAGCTTCAGGTCTTGAACTTCATCGAAACACGGCTTCTTCATCCAATATGATCAACCGCACCATGAATGAGATGCAAATGGAGGTGCAGCGAAGATTACACGAACAATTAGAGGTACAAAGACACTTGCAGTTGCGGATCGAGGCACAAGGGAAGTATATGCAGAGTATATTAGAGAAGGCTTGTCAAACCCTCGCCGGTGAAAACATGGCAGCTTCCGGCGGGGGATACAAGGCCATGGGTGGCAATATCCCAAATAATAATAACGGACAGGGCGGTGGCATTGGGGACATGGGCGGAGGAGCTGGCATCAAAGATTTTGGATTCCCTTCTTTTCAAGACCTCAACCTCTATGGATCAGGAAGCGACCAGCTCGACCTTCAGCAAAACGTGGACGGATTCATGGCTCACAATGAAAGCTTACTGTGCTTGGGAAAGAAGAAGCCGAGGCCACCGCCGGCAAATTACGGATCGGGAAAAGGTGCGTTGGACTGGGCGGATGATCTCCGGCTGCAAGACATAGGAATGGCGCCGCCGTCGCAAGAAGATGATGATCATTTCAAAGCTGGCATTGGTGCAACGCTGGTGGAAAGAGATCATTTGGAGGAAATGTATGAGGCCAAGCCAGTGGTGTCGGATGACACTGCGCCCTTAAAGCTTCAGAGGCCGTCGCCCAGAAGGACACCCCTTTCGGCGGATAGACCCAATCAGCCTCTTACCAGCGCTCCTCAGCCCACACTTTCACCTTTTGGTTAA 1080 51.11 MFHPKKASSNMNNSHERAAAGMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDGMRASGLELHRNTASSSNMINRTMNEMQMEVQRRLHEQLEVQRHLQLRIEAQGKYMQSILEKACQTLAGENMAASGGGYKAMGGNIPNNNNGQGGGIGDMGGGAGIKDFGFPSFQDLNLYGSGSDQLDLQQNVDGFMAHNESLLCLGKKKPRPPPANYGSGKGALDWADDLRLQDIGMAPPSQEDDDHFKAGIGATLVERDHLEEMYEAKPVVSDDTAPLKLQRPSPRRTPLSADRPNQPLTSAPQPTLSPFG 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 571209 573821 - Tan0003439.1 Tan02g0014 742640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0014 359 MobiDBLite consensus disorder prediction 313 359 - -
Tan02g0014 359 FunFam Myb family transcription factor 36 94 - -
Tan02g0014 359 SUPERFAMILY Homeodomain-like 36 92 IPR009057 -
Tan02g0014 359 NCBIfam myb-like DNA-binding domain, SHAQKYF class 37 92 IPR006447 GO:0003677(InterPro)
Tan02g0014 359 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 34 94 IPR017930 -
Tan02g0014 359 MobiDBLite consensus disorder prediction 338 359 - -
Tan02g0014 359 Pfam MYB-CC type transfactor, LHEQLE motif 132 172 IPR025756 -
Tan02g0014 359 Gene3D - 36 94 - -
Tan02g0014 359 Pfam Myb-like DNA-binding domain 39 89 IPR001005 -
Tan02g0014 359 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 9 189 IPR046955 GO:0003700(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0014 Tan-Chr2:571209 Tan02g0016 Tan-Chr2:571209 3.70E-156 dispersed
Tan02g0014 Tan-Chr2:571209 Tan02g0015 Tan-Chr2:571209 3.10E-195 tandem
Tan10g0520 Tan-Chr10:4152978 Tan02g0014 Tan-Chr2:571209 3.30E-39 transposed
Tan02g0014 Tan-Chr2:571209 Tan05g0577 Tan-Chr5:4195205 5.90E-85 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26635 PF00249 Myb_DNA-binding 1.90E-06 CL0123 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0014 - - - 0.0