Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0016 ATGAGAGTTATGGGTGTAAAAGGTCTTACTCTTTACCACCTCAAGAGCCATCTCCAGAAATTTAGACTGGGAAAGCAGCCTCACAAGGAATTCAATGATCACTCAATTAAGGATGGTATGAGAGCTTCAGGTCTTGAACTTCATCGAAACACGGCTTCTTCATCCAATATGATCAACCGCACCATGAATGAGATGCAAATGGAGGTGCAGCGAAGATTACACGAACAATTAGAGGTACAAAGACACTTGCAGTTGCGGATCGAGGCACAAGGGAAGTATATGCAGAGTATATTAGAGAAGGCTTGTCAAACCCTCGCCGGTGAAAACATGGCAGCTTCCGGCGGGGGATACAAGGCCATGGGTGGCAATATCCCAAATAATAATAACGGACAGGGCGGTGGCATTGGGGACATGGGCGGAGGAGCTGGCATCAAAGATTTTGGATTCCCTTCTTTTCAAGACCTCAACCTCTATGGATCAGGAAGCGACCAGCTCGACCTTCAGCAAAACGTGGACGGATTCATGGCTCACAATGAAAGCTTACTGTGCTTGGGAAAGAAGAAGCCGAGGCCACCGCCGGCAAATTACGGATCGGGAAAAGGTGCGTTGGACTGGGCGGATGATCTCCGGCTGCAAGACATAGGAATGGCGCCGCCGTCGCAAGAAGATGATGATCATTTCAAAGCTGGCATTGGTGCAACGCTGGTGGAAAGAGATCATTTGGAGGAAATGTATGAGGCCAAGCCAGTGGTGTCGGATGACACTGCGCCCTTAAAGCTTCAGAGGCCGTCGCCCAGAAGGACACCCCTTTCGGCGGATAGACCCAATCAGCCTCTTACCAGCGCTCCTCAGCCCACACTTTCACCTTTTGGTTAA 876 49.89 MRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDGMRASGLELHRNTASSSNMINRTMNEMQMEVQRRLHEQLEVQRHLQLRIEAQGKYMQSILEKACQTLAGENMAASGGGYKAMGGNIPNNNNGQGGGIGDMGGGAGIKDFGFPSFQDLNLYGSGSDQLDLQQNVDGFMAHNESLLCLGKKKPRPPPANYGSGKGALDWADDLRLQDIGMAPPSQEDDDHFKAGIGATLVERDHLEEMYEAKPVVSDDTAPLKLQRPSPRRTPLSADRPNQPLTSAPQPTLSPFG 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 571209 573821 - Tan0003439.3 Tan02g0016 742642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0016 291 MobiDBLite consensus disorder prediction 270 291 - -
Tan02g0016 291 Pfam MYB-CC type transfactor, LHEQLE motif 64 104 IPR025756 -
Tan02g0016 291 Gene3D - 1 26 - -
Tan02g0016 291 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 1 121 IPR046955 GO:0003700(InterPro)
Tan02g0016 291 MobiDBLite consensus disorder prediction 245 291 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0014 Tan-Chr2:571209 Tan02g0016 Tan-Chr2:571209 3.70E-156 dispersed
Tan02g0016 Tan-Chr2:571209 Tan05g0577 Tan-Chr5:4195205 3.70E-53 dispersed
Tan02g0015 Tan-Chr2:571209 Tan02g0016 Tan-Chr2:571209 1.00E-153 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0016 - - - 0.0