Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0022 ATGTTAAAGATTTTCTCTGTTTTGGTTTTCCTGATCTTGATTATCCTCCCTGCTGATCTAGTCCACGGCGGGCGGGAGTCATGTAGTTGTGATTCCGCCGCCGCCGCCGAGCACAAGGCAGAGGAGGCGATTAAATACAAGGTGGGTTCGATTGCTTCGGTACTCGTGGCCGGCGCTGCGGGTGTGAGCCTTCCATTGGTGGGCAAGAAGATTCCGTCTCTAAGGCCTGAAAATGACATATTTTTCATGATCAAGGCTTTTGCTGCGGGGGTCATTTTAGGAACTGGGTTCATTCACATACTGCCCGATGCCTTCCAAGACCTGACCTCACCCTGCATCGGGCAGAATCCTTGGGGCAATTTCCCATTCGCTGGCTTCATTGCAATGGTCTCTTCCATCGGCACCTTGATGGTGGACACATTTGCAACCAGCTTTTACCAGAGACGCCACTTCAGTAAAACAATTGCAGACCAGCTGGAATTGGAAAGGGGCCAAGAGCATGCCGGTCACGTGCATGTCCACACGCACGCCACACATGGCCACTCTCACGGCTCTGCTGCACCCTCCGGAGAATTGAGTCTGACTGAGTTAATCCGGTACCGGATTATTTCTCAGGTGTTGGAACTGGGAATTGTGGTTCATTCAGTAATAATTGGGATTTCTCTTGGTGCCTCTCAGAGCCCTGCAACCATTAAGCCACTGCTGGTGGCTCTGTCTTTCCACCAGTTTTTTGAGGGCATGGGACTCGGTGGCTGCATTTCCCAGGCACAGTTTAGGTGGCGATCAGCGGCAGCAATGGCGACATTTTTCTCACTGACAGCGCCTGTGGGAATTGCAGTGGGAATCGGAATCTCGGGAGTTTACAAAGACAACAACCGGACGACTCTAATCGTGGAAGGAAGCATGAACTCTGCATCGGCGGGGATATTGATATACATGGCGCTGGTGGATCTTCTTGCTGCGGATTTCATGAACCCAAGGATGCAAAATAATTTGGGGCTTCAATTAGGAGCTAATATCTCTCTGCTTCTCGGGGCTGCTTGCATGTCTGTATTGGCCAAATGGGCTTAA 1071 50.98 MLKIFSVLVFLILIILPADLVHGGRESCSCDSAAAAEHKAEEAIKYKVGSIASVLVAGAAGVSLPLVGKKIPSLRPENDIFFMIKAFAAGVILGTGFIHILPDAFQDLTSPCIGQNPWGNFPFAGFIAMVSSIGTLMVDTFATSFYQRRHFSKTIADQLELERGQEHAGHVHVHTHATHGHSHGSAAPSGELSLTELIRYRIISQVLELGIVVHSVIIGISLGASQSPATIKPLLVALSFHQFFEGMGLGGCISQAQFRWRSAAAMATFFSLTAPVGIAVGIGISGVYKDNNRTTLIVEGSMNSASAGILIYMALVDLLAADFMNPRMQNNLGLQLGANISLLLGAACMSVLAKWA 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 598251 600081 - Tan0018454.1 Tan02g0022 742648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0022 356 PANTHER ZINC/IRON TRANSPORTER 41 355 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Tan02g0022 356 NCBIfam ZIP zinc/iron transport family 30 356 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
Tan02g0022 356 Pfam ZIP Zinc transporter 45 353 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4205 Tan-Chr1:106832392 Tan02g0022 Tan-Chr2:598251 4.30E-96 dispersed
Tan01g4206 Tan-Chr1:106832392 Tan02g0022 Tan-Chr2:598251 1.40E-61 dispersed
Tan02g0022 Tan-Chr2:598251 Tan05g2801 Tan-Chr5:80134388 1.30E-84 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0022 K14709 - csv:101216720 501.13