Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0055 ATGGGGAAGAGACGTAATAACGAGAAACAAAAGGTAATTCTACCGCCGGAGCTTCCACCAGAGATCACCGAGGAAGAAATTGAGGTCTCCGATGAGGACTTGCAGTTTGTCAAGGAGAACCGAGACTATGCCGTCTCTGTTTCCCGTTTAGACACGGTTTCCATTACCAAGCATGTTAAGCGTATTGCTGATGTTGAAGAAGATGCTTTGGAGGCTTTATACGAGAAACGTTTGCGTAAGAAGTCACTGCAGAAACAGGAGGAGGAAAAGAATCCCCAGGTTGATCGCATGGATGCCCTTCCTGTTAAAACACTTGACGGGAAACTCTACTACCGGACATCAAAAACATCCGAAAATGGTGCCAATGAAGAGGAAGTGGAAGAGGACCGGGTAGATAATGGTATATTGAAGTTAACTAAAGCAGAAAGGAGGGCAAAACAAAAGAAACTTAAGAAGGTTGCTAAGAAACAAGAGGATGTATCCAAAGCCGAAGAAGTTGAACCAACCCCACAAGCAGCAGTTATGGCCGAAGTGGTAGAAGACCTTACTGCTGAGAAGACATTTGAAAGTAAGAAGCAGAAACTTGCGGAGCTTGGAATTGCATTGCTTGCAGACCCAAATTCCAATATTAAATCTCTGAAGGAGATACTACAGATCGCTAAGGATAATGATCAAGCAATAGTGAAACTCGGGCTTCTATCATTATTGGCTGTTTTTAAAGACATTATACCTGGTTATCGGATTCGTCTTCCAACAGAAAAGGAGCTAGAAATGAAAGTATCCAAGGATGTTCAGAAAATGCGGAACTACGAGTCTACTCTTCTCACTGCTTATAAGGGATACTTGCAGAGGCTAATGTCATTAGAAAAATTGACGTCTTTTCAGCATGTTGTTATTCGTTGTATCTGTACTTTGCTTGAAGCAGTTCCCCACTTCAACTTTCAAGAGACATTGTTAGGTATCGTTGTTAAAAACATAAGCTCCACTGACGATGTAGTAAGAAAACTTTGTTGTGGTGCTATTAAGTCTTTATTCATCAACGAGGGAAAGCATGGTGGTGAAGCAACTGTGGAGGCTGTCCGGCTGATTGCTAATCATGTAAAATCACATGACTGTCAACTGCATCCTGATTCTATCGAGCCCTTCGTACACTTAACATTTGACGAGGATCTGGGGAAAGCAGAAAAGAAAGATGAGCATATTAAAGTAAAGAGCAAAAAACACAAGAAAATGAAGAATCGTGAGGAATCAAGTCATTTGCAGGGGAATGAAGGAAGACAAAGTATGAGGACAAAGTTTACTGAAGAGGTTGTTGCTGATTACAGGGCTGCTTCTCTTGCTCCAGATGTAATGAAGCAAAGAGAGATGCAGTCAGATACACTTTCTGCTGTATTTGAAACATATTTCCGGATCTTGAGGCATACAATGCAAACATTAACTGCTAGGTCTGAAGCAAGTATTACTGCATCTACTACCAGCACGCTTGGATCCCATCCTCTGCTTGCTCCATGTTTGAATGGATTGGGGAAATTCTCGCATCTCATCGATTTAGATTTCATGGGTGATCTTATGAATTATCTAAAAAGGCTTGCTTCTGGTGGTGATAATTCTTCTGAGAAACAGATGCAATGTTTGACTGTGTCTGAGCGTCTTCAGTGTTGCATTGTGGCATTTAAAGTAATGAGGAAAAACCTTGATGCTTTGAATGTTGATCTACAGGACTTTTTTGTCCAGCTATACAATATTGTACTTGAGTACAGGCCTGGGAGAGATCGTGGTGAAGTGTTAGCTGAAGCTTTGAAGATAATGTTGTGCGATGATAGACAGCATGACATGCAAAAGGCAGCTGCATTTATTAAGCGATTGGCTACTTTCTCATTATGCTTTGGATCTGCAGAGTCGTTGGCAGCCTTGGTCACCGTAAAGCATCTTCTTCAAAAAAATGTCAAGTGCCGCAACCTTTTGGAAAATGATGCCGGAGGAGGTTCAGTGTCTGGCTCAATTGCGAAATATCAGCCATATGCATCTGATCCAAATTTGAGTGGCGCTCTTGCTTCTGTCCTTTGGGAACTTAATCTTCTGTGGAAGCATTATCATCCAGCTGTCTCGACGATGGCTGGTAGTATATCAAACATGAATAATGCTCAAAACCAAGTCTATATCTCCACTGTTTCTCCCCAACAGGCATTCAAAGACTTGTCGCTGGAACATGAGTCTTTCAACCCACAATTTAACGCCAGAAAAGTTAACAAGAGGAAACGAGCTACCAAATCTTCCCAGTCTACTCTTGATACGTGCAATGCCATAGACGAAACCGAAGTGAAGGAAAAGCTTTCGACAAGATTCTCTCTTCTTCGAGACATCAAGGACAATGAAAGATTGAGAACTGAATTGGATCGTACCACTTTGTCTTTGCAGCTATACGAAGAATACAAAAGGCAAAAGAAAAAATCGAAAAAGTCCAGGATTATTTGA 2475 41.45 MGKRRNNEKQKVILPPELPPEITEEEIEVSDEDLQFVKENRDYAVSVSRLDTVSITKHVKRIADVEEDALEALYEKRLRKKSLQKQEEEKNPQVDRMDALPVKTLDGKLYYRTSKTSENGANEEEVEEDRVDNGILKLTKAERRAKQKKLKKVAKKQEDVSKAEEVEPTPQAAVMAEVVEDLTAEKTFESKKQKLAELGIALLADPNSNIKSLKEILQIAKDNDQAIVKLGLLSLLAVFKDIIPGYRIRLPTEKELEMKVSKDVQKMRNYESTLLTAYKGYLQRLMSLEKLTSFQHVVIRCICTLLEAVPHFNFQETLLGIVVKNISSTDDVVRKLCCGAIKSLFINEGKHGGEATVEAVRLIANHVKSHDCQLHPDSIEPFVHLTFDEDLGKAEKKDEHIKVKSKKHKKMKNREESSHLQGNEGRQSMRTKFTEEVVADYRAASLAPDVMKQREMQSDTLSAVFETYFRILRHTMQTLTARSEASITASTTSTLGSHPLLAPCLNGLGKFSHLIDLDFMGDLMNYLKRLASGGDNSSEKQMQCLTVSERLQCCIVAFKVMRKNLDALNVDLQDFFVQLYNIVLEYRPGRDRGEVLAEALKIMLCDDRQHDMQKAAAFIKRLATFSLCFGSAESLAALVTVKHLLQKNVKCRNLLENDAGGGSVSGSIAKYQPYASDPNLSGALASVLWELNLLWKHYHPAVSTMAGSISNMNNAQNQVYISTVSPQQAFKDLSLEHESFNPQFNARKVNKRKRATKSSQSTLDTCNAIDETEVKEKLSTRFSLLRDIKDNERLRTELDRTTLSLQLYEEYKRQKKKSKKSRII 824
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 732502 739807 + Tan0004390.1 Tan02g0055 742681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0055 824 MobiDBLite consensus disorder prediction 398 427 - -
Tan02g0055 824 Pfam Nucleolar complex-associated protein 191 281 IPR011501 -
Tan02g0055 824 Coils Coil 138 166 - -
Tan02g0055 824 PIRSF Noc3 3 822 IPR016903 -
Tan02g0055 824 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 7 767 IPR016903 GO:0003682(PANTHER)|GO:0005730(PANTHER)|GO:0006270(PANTHER)
Tan02g0055 824 SUPERFAMILY ARM repeat 212 603 IPR016024 -
Tan02g0055 824 Pfam CBF/Mak21 family 551 706 IPR005612 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0055 K14834 - csv:101213821 1289.63