Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0057 ATGTCCATGGCGTATTCGTCTTTAGGTTTCATCTTTGCTCTTTGTGCCATTGCTTCCATCTTCACCCACCTGATTGTTTTGTCTCAAGCTCAGAATTCAACTCAACCCATCACTGATCCTGATGAAGCAAGAGCTCTAAATTCCATATTTAGACAATGGCGTATATCGGCGCCAGCAGGGGCGTGGAATATAAGTGGGAATCTATGCAGTGGGAGGGCAGTCGACACTACCACCAACGTCGATGTTGGTGGAAACCTCAATCCTCTTATAAAATGCGATTGCTCAGCCAACAACGGTGCCACTTGCCACATTACTCAAATGCACGTGTATGCAATAAATGTTGTTGGTGTACTCCCACCAGAGCTATGGACATTAACTTCCCTCACCTATTTGAAGTTGGATCAAAATTTCTTGACAGGAACGCTATCTGCATCTGTTGGTAATCTCACACAATTACGAACCTTGAGCCTTGGCATTAATGCACTATCAGGGGAACTTCCGAAGGAACTTGGATCTCTTACTAATCTGACTCTGTTGGCATTCGGGTCCAATAATTTCTCTGGTTCCTTACCACCAGAACTTGGAAATCTTTCTATGCTAAGGGAACTATACATTGATAGCTCTGGAGTTTCTGGTGATATTCCTCAATCATTTTCAAGTCTTATAAACTTGCGTACATTATGGGCATCAGACAATGAATTAACTGGCAGAATACCTGATTTCATCGGAAGTTGGACAAGTCTTACATCTTTGAGGTTTCAAGGAAACTCCTTCTCAGGTCCCATACCATCAACATTTTCAAACTTGACATCTTTGACTGAGTTGAGAATAAGTGATTTATCCAATGGGAGCTCTTCTCTGGCATTCATCAGTAATATGAAAAATTTAAATCTCCTGGTGTTGAGAAATAATAAAATGTCAGGTTCAATTCCATCCAACATTGGAGAATTTCAAAGACTTTCCCAGCTGGACTTGAGCTTCAACAACTTGACAGGAGAGATTCCAAGCTCACTTTTCAATTTGAGTTCACTGTCACACTTGTTTCTTGGAAATAACAAATTAAATGGGACCATACCTGCTCAGAAGAGTCCTTCCCTTCTTAATATAGACTTGTCATATAATGATTTATCAGGGAGCTTTCCTTCTTGGATCAACCAGCCAAACTTACAGCTAAATGTAGTTGCAAACAACTTTACAATTGATAGTTCAAGTAGCAGTGGTTTGCCTTCTGGATTGCATTGTCTTCAACGCAACTTTCCTTGTAATCGAGGTCGCCCAATATATTCTAATTTTGGGATCAAGTGTGGAGGTCCACAGATGACAAGTTCATCAGGTATTTTGTTTGAAAGGGAAAATGAGACTCTCGGTCCGGCTACGTACTTTGTAACTGAGTCAAATAGGTGGGCCGTTAGTAATACTGGATACTTTACTGGGACCAACAATCCTGAATACATAGCCAATACATTGTCCCAATTCCCAAACACCATGGACACAGAGCTTTTTCAGACACAACGACTATCTGCTTCATCATTGAGATACTATGGACTGGGGCTTGAGAATGGCAACTACACTGTGAACCTTCAGTTTGCAGAAATAGCTTACCCAGATTCAAATACCTGGCAAAGCCGTGGGAGGCGCGTCTTTGATATACACATCCAGGGAAATCGTGTCTTACAGAATTTTGATATTAGAAGGGAAGCAGGTGGCTCTTTCCTTGCTGTTAGAAGGAGTTTTACGGCTGTGGTTACAGAAAACTTCCTGGAAATTCATCTTTTTTGGGCTGGGAAAGGTACTTGCTGCATACCTAATCAGGGTGCTTATGGACCCTCTATTTCAGCCATCAGTGCTACCCCAGATTTTGAACCAACTGTCAGTAACTTACCTCCAAGCACTAAGGAGAATAATAGAACGGGCCTAATTGTAGGGCTCGTTGTTGGTTTAGGATCTGTTTTCTTTCTGATTATTGGCGCAGTTTTCATTGTTGTCCAGAGAAGGAAAAGGCGTCGTGCCCATGAAGATGAAGAGCTCCTGGGAATAGATGCTAGACCGTACACATTTAGTTTTTCTGAACTAAGGGGTGCTACAAGCGACTTTATTTCATCTAACAAACTTGGCGAGGGAGGATTTGGACCTGTTTACAAGGGAACACTAAGTGATGGAAGAATGGTTGCTGTGAAGCAACTTTCAGTGGCATCCCACCAAGGAAAGAGCCAGTTTGTTGCTGAGATTGCTACAATATCTGCCGTGCAACATCGTAACCTTGTGAAACTATATGGATGTTGCATAGAAGCTGATAAACGTCTCCTTGTTTATGAGTTTCTTGAAAATAAGAGTCTTGACCAAGCATTATTTGATAAAAAACATTTGATTATTGATTGGCCAACACGTTTTGACATATGCGTGGGTGTAGCAAGAGGTCTCACTTACCTTCATGAGGAATCAAGACTTCGCATAGTGCACAGAGATGTAAAGGCCAGTAACATCTTGCTTGATGGTAATCTGAATCCCAAAATTTCAGATTTTGGCTTAGCCAAACTTTATGATGACAAAAAGACTCATATAAGCACCCGTGTTGCTGGGACAATTGGTTATCTTGCACCTGAGTATGCCATGCGTGGCCACCTTACGGAGAAGGCTGACGTCTTTGGATTTGGCGTTGTGGCTCTTGAAATTGTTAGTGGAAGGCCAAATTCAGACCCAAGCTTAGAGCAAGACAAAGTTTATCTTCTCGAATGGGCATGGTACCTCCACGAAAACAACCTTGAACTTGAGATGGTGGACTCTGTGTTATCAGAGTACAGCAAGGAGGAAGTGAAGAGGGTGATTGGTGTAGCTCTTCTGTGCACTCAAACATCCCCAGCTCTTCGGCCACCGATGTCCCGTGTGGTGGCAATGCTGACTGGAGACGCCGAAGTGGCTGCTGTAACATCCAAACCAGGATACCTGACAGATTGGAGATTTGATGACATTACAAGCTTTATAGATAGTCCATCAACTGAAGAACCTGATACTGGCCGTTATGCATCGACAAGTTCGAATATTGTTAATACAAATCACTCGCCAACCACTGATTCTGACCCAATGCTCCGTGGATTATCAGGGGAGGGTAGGTGA 3114 42.55 MSMAYSSLGFIFALCAIASIFTHLIVLSQAQNSTQPITDPDEARALNSIFRQWRISAPAGAWNISGNLCSGRAVDTTTNVDVGGNLNPLIKCDCSANNGATCHITQMHVYAINVVGVLPPELWTLTSLTYLKLDQNFLTGTLSASVGNLTQLRTLSLGINALSGELPKELGSLTNLTLLAFGSNNFSGSLPPELGNLSMLRELYIDSSGVSGDIPQSFSSLINLRTLWASDNELTGRIPDFIGSWTSLTSLRFQGNSFSGPIPSTFSNLTSLTELRISDLSNGSSSLAFISNMKNLNLLVLRNNKMSGSIPSNIGEFQRLSQLDLSFNNLTGEIPSSLFNLSSLSHLFLGNNKLNGTIPAQKSPSLLNIDLSYNDLSGSFPSWINQPNLQLNVVANNFTIDSSSSSGLPSGLHCLQRNFPCNRGRPIYSNFGIKCGGPQMTSSSGILFERENETLGPATYFVTESNRWAVSNTGYFTGTNNPEYIANTLSQFPNTMDTELFQTQRLSASSLRYYGLGLENGNYTVNLQFAEIAYPDSNTWQSRGRRVFDIHIQGNRVLQNFDIRREAGGSFLAVRRSFTAVVTENFLEIHLFWAGKGTCCIPNQGAYGPSISAISATPDFEPTVSNLPPSTKENNRTGLIVGLVVGLGSVFFLIIGAVFIVVQRRKRRRAHEDEELLGIDARPYTFSFSELRGATSDFISSNKLGEGGFGPVYKGTLSDGRMVAVKQLSVASHQGKSQFVAEIATISAVQHRNLVKLYGCCIEADKRLLVYEFLENKSLDQALFDKKHLIIDWPTRFDICVGVARGLTYLHEESRLRIVHRDVKASNILLDGNLNPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFGFGVVALEIVSGRPNSDPSLEQDKVYLLEWAWYLHENNLELEMVDSVLSEYSKEEVKRVIGVALLCTQTSPALRPPMSRVVAMLTGDAEVAAVTSKPGYLTDWRFDDITSFIDSPSTEEPDTGRYASTSSNIVNTNHSPTTDSDPMLRGLSGEGR 1037
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 761236 788569 + Tan0015680.1 Tan02g0057 742683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0057 1037 Pfam Protein tyrosine and serine/threonine kinase 701 964 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0057 1037 Gene3D Transferase(Phosphotransferase) domain 1 774 978 - -
Tan02g0057 1037 CDD STKc_IRAK 704 968 - -
Tan02g0057 1037 Gene3D - 430 618 - -
Tan02g0057 1037 Pfam Malectin domain 431 614 IPR021720 -
Tan02g0057 1037 FunFam Leucine-rich repeat receptor-like protein kinase 667 773 - -
Tan02g0057 1037 Gene3D Ribonuclease Inhibitor 171 247 IPR032675 -
Tan02g0057 1037 Gene3D Ribonuclease Inhibitor 248 420 IPR032675 -
Tan02g0057 1037 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 23 992 IPR051824 GO:0005886(PANTHER)
Tan02g0057 1037 FunFam Putative LRR receptor-like serine/threonine-protein kinase 283 406 - -
Tan02g0057 1037 ProSiteProfiles Protein kinase domain profile. 698 972 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0057 1037 SUPERFAMILY L domain-like 103 403 - -
Tan02g0057 1037 CDD TM_EGFR-like 634 671 - -
Tan02g0057 1037 SUPERFAMILY Protein kinase-like (PK-like) 682 1000 IPR011009 -
Tan02g0057 1037 ProSitePatterns Serine/Threonine protein kinases active-site signature. 818 830 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0057 1037 SMART serkin_6 698 966 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0057 1037 MobiDBLite consensus disorder prediction 995 1027 - -
Tan02g0057 1037 Pfam Leucine Rich Repeat 247 269 IPR001611 GO:0005515(InterPro)
Tan02g0057 1037 Pfam Leucine Rich Repeat 223 244 IPR001611 GO:0005515(InterPro)
Tan02g0057 1037 Pfam Leucine Rich Repeat 320 341 IPR001611 GO:0005515(InterPro)
Tan02g0057 1037 MobiDBLite consensus disorder prediction 995 1037 - -
Tan02g0057 1037 Gene3D Phosphorylase Kinase; domain 1 659 773 - -
Tan02g0057 1037 FunFam Leucine-rich repeat receptor-like protein kinase 428 618 - -
Tan02g0057 1037 Gene3D Ribonuclease Inhibitor 56 170 IPR032675 -
Tan02g0057 1037 FunFam Os05g0263100 protein 43 282 - -
Tan02g0057 1037 FunFam Putative LRR receptor-like serine/threonine-protein kinase 774 978 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0057 Tan-Chr2:761236 Tan11g2080 Tan-Chr11:44418662 4.60E-183 dispersed
Tan11g2078 Tan-Chr11:44376571 Tan02g0057 Tan-Chr2:761236 2.30E-33 dispersed
Tan02g0057 Tan-Chr2:761236 Tan05g2539 Tan-Chr5:76713709 1.30E-137 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67162 PF07714 PK_Tyr_Ser-Thr 1.90E-45 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0057 - - - 0.0