Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0063 ATGGCAACAGATCAGATGATGATGAATGGAAGCTGCAAAAAGGGCGCCCCATCGCCTTGCGCTGCGTGCAAGCTTCTGCGGCGGCGGTGCGCTCAGGACTGCGTTTTTGCTCCTTATTTCCCTGCCGATCAGCCCCACAAATTCTCCAGTGTTCACAAGGTCTTTGGAGCTAGTAATGTCAGCAAATTGTTGCAGGAGTTAGGAGAACAAGAACGAAGCGACGCAGTGAGCTCGATGGTGTACGAGGCAAACGCGAGGATTCGAGACCCGGTTTACGGGTGCGTGGGAACAATATCATGTCTACAACGGCAAGTGGATGCGCTACAACAGCAATTGGCGATGACACAGGCTCAGCTGCTTCATTTGAAAATGGGCCAATTTTCTTCAACATTATCGCAATCATCATCCACTGATAACCTTCTCCCTTCGCCGCCCAATATCAATGTCAATGTGGGCAATTCTGCATCCTTGTGGTCTTGCTAG 483 50.52 MATDQMMMNGSCKKGAPSPCAACKLLRRRCAQDCVFAPYFPADQPHKFSSVHKVFGASNVSKLLQELGEQERSDAVSSMVYEANARIRDPVYGCVGTISCLQRQVDALQQQLAMTQAQLLHLKMGQFSSTLSQSSSTDNLLPSPPNINVNVGNSASLWSC 160
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 823586 827071 - Tan0014877.1 Tan02g0063 742689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0063 160 Coils Coil 98 118 - -
Tan02g0063 160 Pfam Lateral organ boundaries (LOB) domain 19 116 IPR004883 -
Tan02g0063 160 ProSiteProfiles LOB domain profile. 18 119 IPR004883 -
Tan02g0063 160 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 18 129 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0063 Tan-Chr2:823586 Tan05g2776 Tan-Chr5:79905354 1.20E-45 dispersed
Tan02g0063 Tan-Chr2:823586 Tan05g0608 Tan-Chr5:4443176 1.80E-49 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26638 PF03195 LOB 1.70E-42 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0063 - - - 0.0