Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0078 ATGTCATCTGGAAGTACTTTGAATACAGAATTGTCAAAGAAAACACCCTTCCTTGGTCTGTCCCTATGGGTTTTGATCTGCTTATGTGTTGGTGCATTTATTGTTTTGATTCTCGGTATCTTATCTGTATGGGTGATGTTTCGAAGAAAAACAAGGAGATCTCCAGAAAACTTCTCTGTTTCTCAAATTCCAAATGTCTCAAAGGATATTAAGGTGGACAGAATAGCGACTCAATCTGTTCACCACAATCATCTTGAGAGTCTTTATCTTTCCATTCATGATAAATCAAGTGACAAGAACTCGGAGAAGATGATTGGTCATTTGGGTATGAGCAAGTCAAGTGATCATGACAACATAAGCCAATGCAGCTCCAATTATCATCATGAAAGGGTTTTTAGCTCACATTCAGGAGAAGAAGGAAGCTCTGGGACTGTTAGAAAGCAGTCTTCCATGTCATATGGAGGGTATGGAGGACTTGTGACTGCCTCTCCTCTCGTTGGCTTGCCCGAAATTTCACATCTTGGTTGGGGTCATTGGTTTACACTCAGGGATCTAGAATTTGCGACAAATCGTTTCTCTGCTGACAATGTGCTTGGTGAAGGAGGTTATGGGGTTGTCTATAAAGGCAGATTGATAAATGGAACTGAGGTTGCAGTGAAGAAACTTCTCAATAATCTGGGACAAGCAGAGAAAGAATTTAGAGTTGAAGTGGAAGCCATTGGCCATGTAAGACACAAGAATCTTGTACGGCTTCTGGGCTATTGCATAGAAGGAGTTCATAGGATGCTGGTTTATGAATATGTAAACAATGGCAACTTAGAACAATGGTTACATGGGGCTATGCGCCAACATGGCACCCTTACTTGGGAGGCCCGGATGAAGGTGCTTCTTGGCACTGCCAAGGCGCTAGCATATTTACATGAAGCAATTGAACCAAAGGTTGTCCATAGAGACATAAAATCAAGCAACATCTTAATCGATGATGAATTTAATGCGAAAGTTTCAGATTTTGGATTGGCCAAACTTCTGGATGCTGGAGAGAGTCATATCACAACTAGAGTAATGGGAACATTTGGCTATGTGGCACCCGAGTATGCTAACACTGGCTTGTTAAACGAGAAGAGCGACATTTATAGCTTTGGTGTTCTCCTTCTAGAAGCAATTACAGGAAGAGACCCTGTGGACTATGGCCGTCCTGCTAATGAGGTTAATCTTGTTGAGTGGTTAAAAGTGATGGTGGGTACAAGGAGAGCTGAGGAAGTTACAGACCCGAATCTTGAAACAAAACCTGCTACACGAGCGTTGAAACGTGCCCTTCTGATTGCACTTAGGTGTGTGGATCCTGAGGCAGATAAGAGACCAAAAATGACTCAAGTTGTTAGGATGCTTGAAGCTGATGACTACCCATCACGTGAGGATCGGAGGAGCCAAAAGAGCAGCGCAGCAAACTCAGAGATCGAATCCACGAAAGAGATCTCCAGTCAAGCCGAGGTCGGAAGTAAACCAGAGGAATCACAAAACAGACCTGCAAACGCATGA 1539 43.08 MSSGSTLNTELSKKTPFLGLSLWVLICLCVGAFIVLILGILSVWVMFRRKTRRSPENFSVSQIPNVSKDIKVDRIATQSVHHNHLESLYLSIHDKSSDKNSEKMIGHLGMSKSSDHDNISQCSSNYHHERVFSSHSGEEGSSGTVRKQSSMSYGGYGGLVTASPLVGLPEISHLGWGHWFTLRDLEFATNRFSADNVLGEGGYGVVYKGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRQHGTLTWEARMKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDAGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPANEVNLVEWLKVMVGTRRAEEVTDPNLETKPATRALKRALLIALRCVDPEADKRPKMTQVVRMLEADDYPSREDRRSQKSSAANSEIESTKEISSQAEVGSKPEESQNRPANA 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 923557 928786 + Tan0007283.4 Tan02g0078 742704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0078 512 PANTHER OS01G0323000 PROTEIN 6 495 IPR052232 -
Tan02g0078 512 MobiDBLite consensus disorder prediction 481 512 - -
Tan02g0078 512 Gene3D Phosphorylase Kinase; domain 1 174 267 - -
Tan02g0078 512 ProSitePatterns Serine/Threonine protein kinases active-site signature. 314 326 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0078 512 SMART serkin_6 192 463 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0078 512 Pfam Protein kinase domain 195 461 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0078 512 ProSitePatterns Protein kinases ATP-binding region signature. 198 221 IPR017441 GO:0005524(InterPro)
Tan02g0078 512 Coils Coil 212 232 - -
Tan02g0078 512 MobiDBLite consensus disorder prediction 463 512 - -
Tan02g0078 512 ProSiteProfiles Protein kinase domain profile. 192 469 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0078 512 SUPERFAMILY Protein kinase-like (PK-like) 176 469 IPR011009 -
Tan02g0078 512 Gene3D Transferase(Phosphotransferase) domain 1 268 482 - -
Tan02g0078 512 FunFam Putative receptor-like serine/threonine-protein kinase 268 478 - -
Tan02g0078 512 CDD STKc_IRAK 198 464 - -
Tan02g0078 512 FunFam Putative receptor-like protein kinase 174 267 - -
Tan02g0078 512 MobiDBLite consensus disorder prediction 463 480 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0076 Tan-Chr2:923557 Tan02g0078 Tan-Chr2:923557 6.30E-290 dispersed
Tan02g0078 Tan-Chr2:923557 Tan05g0624 Tan-Chr5:4631506 6.40E-218 dispersed
Tan02g0077 Tan-Chr2:923557 Tan02g0078 Tan-Chr2:923557 6.30E-290 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67166 PF00069 Pkinase 3.40E-48 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0078 - - - 0.0