Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan02g0078 | ATGTCATCTGGAAGTACTTTGAATACAGAATTGTCAAAGAAAACACCCTTCCTTGGTCTGTCCCTATGGGTTTTGATCTGCTTATGTGTTGGTGCATTTATTGTTTTGATTCTCGGTATCTTATCTGTATGGGTGATGTTTCGAAGAAAAACAAGGAGATCTCCAGAAAACTTCTCTGTTTCTCAAATTCCAAATGTCTCAAAGGATATTAAGGTGGACAGAATAGCGACTCAATCTGTTCACCACAATCATCTTGAGAGTCTTTATCTTTCCATTCATGATAAATCAAGTGACAAGAACTCGGAGAAGATGATTGGTCATTTGGGTATGAGCAAGTCAAGTGATCATGACAACATAAGCCAATGCAGCTCCAATTATCATCATGAAAGGGTTTTTAGCTCACATTCAGGAGAAGAAGGAAGCTCTGGGACTGTTAGAAAGCAGTCTTCCATGTCATATGGAGGGTATGGAGGACTTGTGACTGCCTCTCCTCTCGTTGGCTTGCCCGAAATTTCACATCTTGGTTGGGGTCATTGGTTTACACTCAGGGATCTAGAATTTGCGACAAATCGTTTCTCTGCTGACAATGTGCTTGGTGAAGGAGGTTATGGGGTTGTCTATAAAGGCAGATTGATAAATGGAACTGAGGTTGCAGTGAAGAAACTTCTCAATAATCTGGGACAAGCAGAGAAAGAATTTAGAGTTGAAGTGGAAGCCATTGGCCATGTAAGACACAAGAATCTTGTACGGCTTCTGGGCTATTGCATAGAAGGAGTTCATAGGATGCTGGTTTATGAATATGTAAACAATGGCAACTTAGAACAATGGTTACATGGGGCTATGCGCCAACATGGCACCCTTACTTGGGAGGCCCGGATGAAGGTGCTTCTTGGCACTGCCAAGGCGCTAGCATATTTACATGAAGCAATTGAACCAAAGGTTGTCCATAGAGACATAAAATCAAGCAACATCTTAATCGATGATGAATTTAATGCGAAAGTTTCAGATTTTGGATTGGCCAAACTTCTGGATGCTGGAGAGAGTCATATCACAACTAGAGTAATGGGAACATTTGGCTATGTGGCACCCGAGTATGCTAACACTGGCTTGTTAAACGAGAAGAGCGACATTTATAGCTTTGGTGTTCTCCTTCTAGAAGCAATTACAGGAAGAGACCCTGTGGACTATGGCCGTCCTGCTAATGAGGTTAATCTTGTTGAGTGGTTAAAAGTGATGGTGGGTACAAGGAGAGCTGAGGAAGTTACAGACCCGAATCTTGAAACAAAACCTGCTACACGAGCGTTGAAACGTGCCCTTCTGATTGCACTTAGGTGTGTGGATCCTGAGGCAGATAAGAGACCAAAAATGACTCAAGTTGTTAGGATGCTTGAAGCTGATGACTACCCATCACGTGAGGATCGGAGGAGCCAAAAGAGCAGCGCAGCAAACTCAGAGATCGAATCCACGAAAGAGATCTCCAGTCAAGCCGAGGTCGGAAGTAAACCAGAGGAATCACAAAACAGACCTGCAAACGCATGA | 1539 | 43.08 | MSSGSTLNTELSKKTPFLGLSLWVLICLCVGAFIVLILGILSVWVMFRRKTRRSPENFSVSQIPNVSKDIKVDRIATQSVHHNHLESLYLSIHDKSSDKNSEKMIGHLGMSKSSDHDNISQCSSNYHHERVFSSHSGEEGSSGTVRKQSSMSYGGYGGLVTASPLVGLPEISHLGWGHWFTLRDLEFATNRFSADNVLGEGGYGVVYKGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRQHGTLTWEARMKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDAGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPANEVNLVEWLKVMVGTRRAEEVTDPNLETKPATRALKRALLIALRCVDPEADKRPKMTQVVRMLEADDYPSREDRRSQKSSAANSEIESTKEISSQAEVGSKPEESQNRPANA | 512 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 923557 | 928786 | + | Tan0007283.4 | Tan02g0078 | 742704 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan02g0078 | 512 | PANTHER | OS01G0323000 PROTEIN | 6 | 495 | IPR052232 | - | |
Tan02g0078 | 512 | MobiDBLite | consensus disorder prediction | 481 | 512 | - | - | |
Tan02g0078 | 512 | Gene3D | Phosphorylase Kinase; domain 1 | 174 | 267 | - | - | |
Tan02g0078 | 512 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 314 | 326 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan02g0078 | 512 | SMART | serkin_6 | 192 | 463 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan02g0078 | 512 | Pfam | Protein kinase domain | 195 | 461 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan02g0078 | 512 | ProSitePatterns | Protein kinases ATP-binding region signature. | 198 | 221 | IPR017441 | GO:0005524(InterPro) | |
Tan02g0078 | 512 | Coils | Coil | 212 | 232 | - | - | |
Tan02g0078 | 512 | MobiDBLite | consensus disorder prediction | 463 | 512 | - | - | |
Tan02g0078 | 512 | ProSiteProfiles | Protein kinase domain profile. | 192 | 469 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan02g0078 | 512 | SUPERFAMILY | Protein kinase-like (PK-like) | 176 | 469 | IPR011009 | - | |
Tan02g0078 | 512 | Gene3D | Transferase(Phosphotransferase) domain 1 | 268 | 482 | - | - | |
Tan02g0078 | 512 | FunFam | Putative receptor-like serine/threonine-protein kinase | 268 | 478 | - | - | |
Tan02g0078 | 512 | CDD | STKc_IRAK | 198 | 464 | - | - | |
Tan02g0078 | 512 | FunFam | Putative receptor-like protein kinase | 174 | 267 | - | - | |
Tan02g0078 | 512 | MobiDBLite | consensus disorder prediction | 463 | 480 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g0076 | Tan-Chr2:923557 | Tan02g0078 | Tan-Chr2:923557 | 6.30E-290 | dispersed | |
Tan02g0078 | Tan-Chr2:923557 | Tan05g0624 | Tan-Chr5:4631506 | 6.40E-218 | dispersed | |
Tan02g0077 | Tan-Chr2:923557 | Tan02g0078 | Tan-Chr2:923557 | 6.30E-290 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67166 | PF00069 | Pkinase | 3.40E-48 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan02g0078 | - | - | - | 0.0 |