Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan02g0079 | ATGTCGAATGATGAAGGCAAAAACCTGTACCAGCCGTATGATCCATTTCTTTACAACCAGTTGGATATGAACCGTTCGATCTTCCAACAACAGCCGTTGGATCCAGCTTTGATGAGTTTCACGAACTTCTTCGACACGTCGTTGGATTACAACAGCCTATCGAGGGCGTTCGACGTGTCGTGCTCTTCCTCAGAAGTGATTTCGGCGGTGGACGACATGTCGAAAAAGAAGGCTTCAGGTGGAGGACGAGGAGGAAAAAGTTTAAACCAATCGTCGACGCCAAATTCATCAGTGTCGTCTTCGTCTAATGAGGCTGCAGCTGAAGAAGATTCAGTCAAGAGCAAGAAAGAAGAGTCAAAAGAGTGCGAGAATAAAGATGAAGAAAAGTCTAAGAAACAGAACATAGCAAAAAAGAAAGAGAAACGGCAGAGGGAGCCACGGTTTGCTTTCTTGACTAAGAGTGAGATTGATCACCTTGAAGATGGATATAGATGGAGAAAATATGGACAGAAGGCAGTAAAAAATAGTCCTTACCCCAGAAGTTACTACAGATGCACCAGTCAAAAATGCTTAGTGAAAAAACGAGTTGAAAGATCATACCAAGATCCATCTGTGGTGATAACTACATATGAAGGCCAACACAACCACCATTGCCCAGCTACACTCCGAGGCCATTCTGCAGGAATAATGTCGTCTCCGTTTTACACATCGGCATCGACATCGGCAACAGCAGCCTCCTCGGGGCCGACCCTTCCCCAAGAACTCTTCTCGCATTTGCTACCGATCACCAACTGCCAGACCGACCCGGCGTCGGCGTCGGCGTCGTCGATGTTGTACCAAAATCTAAACCTCCAGCAACACCTTCAAATGCCTGATCATTATGGTTTGTTACAAGATTTGTTCACTCAAAAATAG | 915 | 45.68 | MSNDEGKNLYQPYDPFLYNQLDMNRSIFQQQPLDPALMSFTNFFDTSLDYNSLSRAFDVSCSSSEVISAVDDMSKKKASGGGRGGKSLNQSSTPNSSVSSSSNEAAAEEDSVKSKKEESKECENKDEEKSKKQNIAKKKEKRQREPRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCLVKKRVERSYQDPSVVITTYEGQHNHHCPATLRGHSAGIMSSPFYTSASTSATAASSGPTLPQELFSHLLPITNCQTDPASASASSMLYQNLNLQQHLQMPDHYGLLQDLFTQK | 304 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 933675 | 936294 | - | Tan0007608.1 | Tan02g0079 | 742705 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan02g0079 | 304 | SMART | WRKY_cls | 159 | 218 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan02g0079 | 304 | FunFam | WRKY transcription factor 57 | 145 | 219 | - | - | |
Tan02g0079 | 304 | MobiDBLite | consensus disorder prediction | 84 | 107 | - | - | |
Tan02g0079 | 304 | Gene3D | WRKY domain | 144 | 220 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan02g0079 | 304 | Pfam | WRKY DNA -binding domain | 160 | 217 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan02g0079 | 304 | MobiDBLite | consensus disorder prediction | 108 | 146 | - | - | |
Tan02g0079 | 304 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 91 | 227 | IPR044810 | GO:0003700(InterPro) | |
Tan02g0079 | 304 | SUPERFAMILY | WRKY DNA-binding domain | 152 | 219 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan02g0079 | 304 | MobiDBLite | consensus disorder prediction | 72 | 146 | - | - | |
Tan02g0079 | 304 | ProSiteProfiles | WRKY domain profile. | 154 | 219 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan02g0079 | 304 | Coils | Coil | 105 | 145 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g0079 | Tan-Chr2:933675 | Tan06g2778 | Tan-Chr6:79967303 | 2.80E-35 | dispersed | |
Tan10g0253 | Tan-Chr10:2242871 | Tan02g0079 | Tan-Chr2:933675 | 4.10E-16 | dispersed | |
Tan11g0469 | Tan-Chr11:3856132 | Tan02g0079 | Tan-Chr2:933675 | 2.00E-15 | dispersed | |
Tan03g0938 | Tan-Chr3:65819121 | Tan02g0079 | Tan-Chr2:933675 | 1.50E-19 | transposed | |
Tan03g2664 | Tan-Chr3:79696956 | Tan02g0079 | Tan-Chr2:933675 | 3.90E-41 | transposed | |
Tan02g0079 | Tan-Chr2:933675 | Tan05g0625 | Tan-Chr5:4648497 | 4.00E-42 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
26640 | PF03106 | WRKY | 2.60E-25 | CL0274 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan02g0079 | - | - | - | 0.0 |