Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0089 ATGCAGACTGATCACCGCAAGAAGAATTCTGCAGAATTGGACTTTTTCTCTGAATATGGCGATGCCAACAGATTCAAAATCCAGGAAGTTATTGGAAAGGGGAGTTATGGTGTGGTTTGTTCAGCTGTTGACACTCTCACTAATGAAAAAGTGGCAATAAAGAAGATACATGATATTTTCGAACACGTATCTGATGCTGCCCGTATTCTTCGTGAGATAAAGCTGCTCAGACTTCTACGTCATCCTGATATTGTCGAAATCAAACACATTATGTTACCACCTTCTCGCAGGGGGTTCAAAGATATCTTTGTTGTGTTTGAGTTGATGGAATCAGATTTGCATCAAGTCATCAAGGCCAATGATGATTTAACAAAAGAGCACTATCAATTTTTCCTTTACCAGCTACTCCGTGCACTGAAATATATTCACACAGCAAATGTCTACCATCGGGATTTAAAGCCAAAGAATATATTAGCAAATGCAAATTGCAAACTCAAAATATGTGATTTTGGTTTGGCTAGAGTTGCTTTCAGTGACACCCCGACAACAATATTTTGGACGGACTATGTTGCTACCAGATGGTATAGGGCTCCAGAGCTATGTGGTTCTTTCTTTTCTAAGTATACTCCTGCCATTGACATTTGGAGTATTGGCTGCATATTTGCTGAAGTACTAACCGGAAAACCACTTTTTCCCGGTAAAAATGTTGTTCATCAGCTTGATTTGATGACAGATCTCCTTGGAACGCCTTCATTAGATACCATTTCTCGGGTAAGAAATGAAAAGGCCAGGAGGTACTTGACTAGTATGAGGAAGAAGCAGCCCATACCCTTTTCACAGAAGTTCCCAAATGCAGATCCTCTAGCCCTGCAATTACTACAACGGTTGCTTGCGTTTGATCCGAAGGATCGACCTACTGCTGAAGAGGCATTGGCAGATCCTTACTTTAAGGGGCTGGCAAAAGTTGAGAGGGAACCTTCTTGCCAGCCAATCTCAAAGGTGGAGTTTGAATTTGAGAGGAGAAAGGTCACAAAGGACGACATTCGCGAGCTGATATTCCGCGAGATACTAGAATACCATCCTCAACTACTGAAAGACTACTTAAATGGAACTGAGAGATCAAATTTTCTCTATCCAAGTGCACTCGATCAGTTCAAAAAACAATTTGCTCATCTCGAAGATAATGGAGGGAAAAGTGGACCAGTTTATCCTCTAGAAAGAAAGCATACATCTCTTCCTAGGTCTTCGGTGCAGTCGAGTACCATTCCTCCTAAAGCAACATCAAATATTGGTTCATTTAAAGACCGATATGCGCCACCAGGGTCGTACAGCAGCCAGCATTACAGAGATCCAGCAGCACAGAGAATTGCTGCTACTCAAGCCAAGCCTGGAAGAATTTCGGGCCCGGTCGTGCCATATGATAGTGGAAGTATCGCTAAAGATGCCTACGACCCAAGAATATTAATTAGAAGTGCCCTTCCTTCGCATGCTATCCATCCAACATATTATTACCAGCAATCTTGCGGCCAAAATGAAGAAAGATCAGCAACAGGGGCTGAGGAAGACGCTTCTTTGCAATGCAAACAAGCCCCTCAATGTGGAATGGCAGCCAAATTAGCAGCAGATACAGCAGCTACTGGTGCTTTCTCAAACCCTTTTTTTATGGCGCGTGTAGGGGTGCACAAGGTGGGAAACAATGACCGTGCTGCACGTTTGCAGGTAAACGCTCAATATGATGCTGGAGGCATAGCTGCTGCCACTGCCACCTCCCATAGAAACACTGGTACGGTCGAGTATGGTATGGCAAGAATGTATTAG 1818 43.29 MQTDHRKKNSAELDFFSEYGDANRFKIQEVIGKGSYGVVCSAVDTLTNEKVAIKKIHDIFEHVSDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRGFKDIFVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNEKARRYLTSMRKKQPIPFSQKFPNADPLALQLLQRLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPISKVEFEFERRKVTKDDIRELIFREILEYHPQLLKDYLNGTERSNFLYPSALDQFKKQFAHLEDNGGKSGPVYPLERKHTSLPRSSVQSSTIPPKATSNIGSFKDRYAPPGSYSSQHYRDPAAQRIAATQAKPGRISGPVVPYDSGSIAKDAYDPRILIRSALPSHAIHPTYYYQQSCGQNEERSATGAEEDASLQCKQAPQCGMAAKLAADTAATGAFSNPFFMARVGVHKVGNNDRAARLQVNAQYDAGGIAAATATSHRNTGTVEYGMARMY 605
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1001157 1005994 + Tan0001114.1 Tan02g0089 742715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0089 605 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0089 605 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524(InterPro)
Tan02g0089 605 FunFam Mitogen-activated protein kinase 111 339 - -
Tan02g0089 605 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Tan02g0089 605 FunFam Mitogen-activated protein kinase 16 118 - -
Tan02g0089 605 MobiDBLite consensus disorder prediction 396 452 - -
Tan02g0089 605 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Tan02g0089 605 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0089 605 MobiDBLite consensus disorder prediction 411 428 - -
Tan02g0089 605 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Tan02g0089 605 Pfam Protein kinase domain 26 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0089 605 CDD STKc_TDY_MAPK 24 361 - -
Tan02g0089 605 SMART serkin_6 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0089 605 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 23 357 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0089 Tan-Chr2:1001157 Tan06g2581 Tan-Chr6:78479159 1.30E-209 dispersed
Tan02g0089 Tan-Chr2:1001157 Tan02g0090 Tan-Chr2:1001157 0.00E+00 tandem
Tan01g0926 Tan-Chr1:8808350 Tan02g0089 Tan-Chr2:1001157 3.60E-202 transposed
Tan02g0089 Tan-Chr2:1001157 Tan05g0630 Tan-Chr5:4684015 3.60E-252 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67167 PF00069 Pkinase 1.10E-66 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0089 - - - 0.0