Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0090 ATGCAGACTGATCACCGCAAGAAGAATTCTGCAGAATTGGACTTTTTCTCTGAATATGGCGATGCCAACAGATTCAAAATCCAGGAAGTTATTGGAAAGGGGAGTTATGGTGTGGTTTGTTCAGCTGTTGACACTCTCACTAATGAAAAAGTGGCAATAAAGAAGATACATGATATTTTCGAACACGTATCTGATGCTGCCCGTATTCTTCGTGAGATAAAGCTGCTCAGACTTCTACGTCATCCTGATATTGTCGAAATCAAACACATTATGTTACCACCTTCTCGCAGGGGGTTCAAAGATATCTTTGTTGTGTTTGAGTTGATGGAATCAGATTTGCATCAAGTCATCAAGGCCAATGATGATTTAACAAAAGAGCACTATCAATTTTTCCTTTACCAGCTACTCCGTGCACTGAAATATATTCACACAGCAAATGTCTACCATCGGGATTTAAAGCCAAAGAATATATTAGCAAATGCAAATTGCAAACTCAAAATATGTGATTTTGGTTTGGCTAGAGTTGCTTTCAGTGACACCCCGACAACAATATTTTGGACGGACTATGTTGCTACCAGATGGTATAGGGCTCCAGAGCTATGTGGTTCTTTCTTTTCTAAGTATACTCCTGCCATTGACATTTGGAGTATTGGCTGCATATTTGCTGAAGTACTAACCGGAAAACCACTTTTTCCCGGTAAAAATGTTGTTCATCAGCTTGATTTGATGACAGATCTCCTTGGAACGCCTTCATTAGATACCATTTCTCGGGTAAGAAATGAAAAGGCCAGGAGGTACTTGACTAGTATGAGGAAGAAGCAGCCCATACCCTTTTCACAGAAGTTCCCAAATGCAGATCCTCTAGCCCTGCAATTACTACAACGGTTGCTTGCGTTTGATCCGAAGGATCGACCTACTGCTGAAGAGGCATTGGCAGATCCTTACTTTAAGGGGCTGGCAAAAGTTGAGAGGGAACCTTCTTGCCAGCCAATCTCAAAGGTGGAGTTTGAATTTGAGAGGAGAAAGGTCACAAAGGACGACATTCGCGAGCTGATATTCCGCGAGATACTAGAATACCATCCTCAACTACTGAAAGACTACTTAAATGGAACTGAGAGATCAAATTTTCTCTATCCAAGTGCACTCGATCAGTTCAAAAAACAATTTGCTCATCTCGAAGATAATGGAGGGAAAAGTGGACCAGTTTATCCTCTAGAAAGAAAGCATACATCTCTTCCTAGGTCTTCGGTGCAGTCGAGTACCATTCCTCCTAAAGCAACATCAAATATTGGTTCATTTAAAGACCGATATGCGCCACCAGGGTCGTACAGCAGCCAGCATTACAGAGATCCAGCAGCACAGAGAATTGCTGCTACTCAAGCCAAGCCTGGAAGAATTTCGGGCCCGGTCGTGCCATATGATAGTGGAAGTATCGCTAAAGATGCCTACGACCCAAGAATATTAATTAGAAGTGCCCTTCCTTCGCATGCTATCCATCCAACATATTATTACCAGCAATCTTGCGGCCAAAATGAAGAAAGATCAGCAACAGGGGCTGAGGAAGACGCTTCTTTGCAATGCAAACAAGCCCCTCAATGTGGAATGGCAGCCAAATTAGCAGCAGATACAGCAGCTACTGGTAAACGCTCAATATGA 1656 42.51 MQTDHRKKNSAELDFFSEYGDANRFKIQEVIGKGSYGVVCSAVDTLTNEKVAIKKIHDIFEHVSDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRGFKDIFVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNEKARRYLTSMRKKQPIPFSQKFPNADPLALQLLQRLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPISKVEFEFERRKVTKDDIRELIFREILEYHPQLLKDYLNGTERSNFLYPSALDQFKKQFAHLEDNGGKSGPVYPLERKHTSLPRSSVQSSTIPPKATSNIGSFKDRYAPPGSYSSQHYRDPAAQRIAATQAKPGRISGPVVPYDSGSIAKDAYDPRILIRSALPSHAIHPTYYYQQSCGQNEERSATGAEEDASLQCKQAPQCGMAAKLAADTAATGKRSI 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1001157 1005994 + Tan0001114.2 Tan02g0090 742716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0090 551 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0090 551 FunFam Mitogen-activated protein kinase 16 119 - -
Tan02g0090 551 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524(InterPro)
Tan02g0090 551 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Tan02g0090 551 Pfam Protein kinase domain 26 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0090 551 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Tan02g0090 551 MobiDBLite consensus disorder prediction 396 452 - -
Tan02g0090 551 FunFam Mitogen-activated protein kinase 111 339 - -
Tan02g0090 551 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0090 551 MobiDBLite consensus disorder prediction 411 428 - -
Tan02g0090 551 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Tan02g0090 551 CDD STKc_TDY_MAPK 24 361 - -
Tan02g0090 551 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 23 357 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Tan02g0090 551 SMART serkin_6 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0926 Tan-Chr1:8808350 Tan02g0090 Tan-Chr2:1001157 3.60E-202 dispersed
Tan02g0090 Tan-Chr2:1001157 Tan05g0630 Tan-Chr5:4684015 1.50E-244 dispersed
Tan02g0089 Tan-Chr2:1001157 Tan02g0090 Tan-Chr2:1001157 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67168 PF00069 Pkinase 8.70E-67 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0090 - - - 0.0