Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0112 ATGGAGGCCAAATCTCTATCTCAAAATCATGTCAGAGCCAAGCTCCATATCCTATTTTCAATTCTACTGCTCCAGTTTGCTACCTTCGGATTGGCAGCCACAGCCAAGCTTCATCGAGACGAAGTGAAAGCGTTGAAAGAGATTGAGAAGAAGATAGGGAAAAACGACTGGAATTTTACCCTAGATCCTTGCAGTGGAGAAGGAAATTGGCGCGTTGTTAATGGAAGAAAAGGCTTCGAAAGCTCCGTCACTTGTGATTGCTCTTTCAGCCACAACTCCACTTGCCGTGTCGTCGCCATAGCTCTGAAGTCCCAGAATCTATCTGGCATTGTGCCACCAGAGTTTTCCAAGCTTCGCTTCCTCAAACAACTAGATCTCAGTCGAAACTGTCTCACTGGTTCTATTCCTCCCCAATGGGCTACCATGCGATTGGTAGAACTCTCTTTCATGGGAAACAAATTGTCCGGCCCATTCCCAAAAGTTCTTACTAATATCACCACCCTCAGAAACCTGAGCATCGAAGGAAATCAGTTTTCTGGTCCAATTCCACCAGAGGTTGGAAAACTAGTCAATTTGGAAAAATTTGTCCTGGCATCAAATGGCTTCACCGGAGAATTGCCTAAAGCACTCAGGAAGTTGTCGAACTTAATTGATATGAGGATAAGTGACAACAACTTCTCTGGAAAGATACCTGAGTTCATTAGTAATTGGACACTGGTTGAAAAACTGCATATACAAGGCTGCTCCCTCGAGGGGCCCATACCTTCAAGTATCTCCACCATGACGAGTTTAACTGATCTGAGAATATCTGACTTAAAAGGTGGAAGGTCTCCTTTTCCACCGTTGAGCAAAATGGAATCCATGAAGACGCTGATACTTAGGAAGTGCTGGATTGTTGGAGATATCCCCAAATACATTGGGGACATGAAAAAGTTGAAAAACTTAGACCTCAGCTACAATGACTTGACTGGTGAAGTTCCTCCATCTTTTGAACGACTGGAAAAAATAGATTACATATATTTGACAGGAAACAAGCTCAATGGAATTATTCCTGGTTGGGTTTTAGGAAGCAACAAGAATGTGGATCTTTCTAACAACAACTTCACTTGGGAAAGCTCGAGCCCAGCTGAGTGTCCTCGAGGGAGTGTAAATTTAGTAGAGACTTACTCACCATCTGCAGAAAAATTAACTAGAATCCATCCCTGCCTAAAAAGGAACTTTCCGTGTTCTGCATCAAAGGAACAGCATCACTACTCTTTGCACATTAACTGTGGCGGTAAAGAAGCATTTGTAACGGGTGAAAGGTTTGAAGCGGATAGAGAAGGTGCTTCAATGTTTTATACTGGTCAGAATTGGGCTTTTAGCAGCACGGGAAGCTTTATGGACAATGATGTTGATGCCGATAACTATATCATAACAAATACATCTGCTCTTTCAAATGTCTCTGTGACTGATTCAGAGCTGTACACAAAAGCGAGAAATTCTCCTCAATCTCTTACATACTATGGGCTCTGTCTCGTAAACGGGAATTACACTGTAAAACTCCATTTTGCAGAGATCGTTTTTATAAATGACAGTTCATTCAACAGCCTTGGGAGGCGAATTTTTGATGTGTACGTTCAGGAAAAGCTGGTCCTGAAAGATTTTGATATAGAAAATGAAGCAGGGGGTACAGGAAAGCCTGTTATAAAAACATTTACTACGGTTGTCACGAGTCATACATTGAAGATCCATTTCTACTGGGCTGGAAGAGGAACAACAGGAATCCCAATTAGAGGAAATTATGGTCCTTTGATATCAGCTATTTCCGTTGATCCTAATTTTACGCCACCCAAGTACCATGTGAAGAAGAATCACACCATCATAATTATTGGGACAGCAGCAGCAGCTTTTGTTCTACTTCTTCTGGTGTTATGTATTATGAGGAGGAAGGGATGGCTGGGGGGCAAGGGATCTGTATATAAAGAGCTTAGAGGTATAGACCTGCAAACAGGATTATTTACAATAAGACAGATTAAAGCAGCCACTAAAAATTTTGATGCTGCAAACAAAGTTGGGGAAGGTGGTTTTGGTGCAGTTTACAAGGGTCTCTTGTCAGACGGTACAATAATTGCAGTCAAGCAGCTGTCATCAAAATCAAAGCAAGGAAATCGAGAATTTGTTAATGAAATAGGCATGATATCTGCACTGCAACACCCAAATCTTGTCAAGCTTTATGGATGTTGTGTTGATGGGAACCAACTAATGTTGATTTATGAATACATGGAAAATAATTGCTTATCACGTGCCCTTTTCAGAAATGACCCAGTATCTAAATTGAGGTTGGACTGGCCCACCAGGCAGAAAATCTGTCTGGGAATAGCTAGAGGTTTGGCCTATCTACATGAGGAGTCAAGATTAAAAATCGTACATAGGGATATCAAGACAAGTAATGTGTTGCTTGATAAGGATTTCAATGCTAAAATTTCTGATTTTGGTTTGGCTAAGCTTCATGAAGATGACAATACCCATATCAGCACCCGAGTTGCCGGAACCATTGGTTATATGGCACCTGAATATGCAATGCGCGGATGCTTGACCAGCAAAGCTGATGTTTATAGCTTTGGAGTTGTTGCCCTGGAAATTGTTAGCGGCAAAAGCAATACCAACTACAGGCCTAAGGAGGATTTTGTTTACCTTCTTGACTGGGCATCTGTTCTGCAAGAAAAAGGAAGCCTATTGGAGTTGGTAGACCCAGCGTTGGGCTCAGATTATTCATCAGAAGAAGCAATGGTGATGCTGAATGTGGCTCTCCTCTGCACCAACGCATCCCCAACTCTGCGCCCTCTAATGTCCCAAGTGGTCAGCATGCTCGAAGGTCGAACTCCAGTGCAAGCACTTCTTTCTGATCCAGGTTTTTCAGCCATCAATTCCAAATTAAAGGCCCTTAGAAATCACTTTTGGCAACAAATGAGCCCCACACGCAGTTTATCATTGGACGATTTCCCAAGTGATTCTTTGAGTTCAAATGTGGAGGCAGAAGAGAATTACCATCTTGTAAGAACCCATTCTGTTAAATCTAATACATGA 3069 42.07 MEAKSLSQNHVRAKLHILFSILLLQFATFGLAATAKLHRDEVKALKEIEKKIGKNDWNFTLDPCSGEGNWRVVNGRKGFESSVTCDCSFSHNSTCRVVAIALKSQNLSGIVPPEFSKLRFLKQLDLSRNCLTGSIPPQWATMRLVELSFMGNKLSGPFPKVLTNITTLRNLSIEGNQFSGPIPPEVGKLVNLEKFVLASNGFTGELPKALRKLSNLIDMRISDNNFSGKIPEFISNWTLVEKLHIQGCSLEGPIPSSISTMTSLTDLRISDLKGGRSPFPPLSKMESMKTLILRKCWIVGDIPKYIGDMKKLKNLDLSYNDLTGEVPPSFERLEKIDYIYLTGNKLNGIIPGWVLGSNKNVDLSNNNFTWESSSPAECPRGSVNLVETYSPSAEKLTRIHPCLKRNFPCSASKEQHHYSLHINCGGKEAFVTGERFEADREGASMFYTGQNWAFSSTGSFMDNDVDADNYIITNTSALSNVSVTDSELYTKARNSPQSLTYYGLCLVNGNYTVKLHFAEIVFINDSSFNSLGRRIFDVYVQEKLVLKDFDIENEAGGTGKPVIKTFTTVVTSHTLKIHFYWAGRGTTGIPIRGNYGPLISAISVDPNFTPPKYHVKKNHTIIIIGTAAAAFVLLLLVLCIMRRKGWLGGKGSVYKELRGIDLQTGLFTIRQIKAATKNFDAANKVGEGGFGAVYKGLLSDGTIIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCVDGNQLMLIYEYMENNCLSRALFRNDPVSKLRLDWPTRQKICLGIARGLAYLHEESRLKIVHRDIKTSNVLLDKDFNAKISDFGLAKLHEDDNTHISTRVAGTIGYMAPEYAMRGCLTSKADVYSFGVVALEIVSGKSNTNYRPKEDFVYLLDWASVLQEKGSLLELVDPALGSDYSSEEAMVMLNVALLCTNASPTLRPLMSQVVSMLEGRTPVQALLSDPGFSAINSKLKALRNHFWQQMSPTRSLSLDDFPSDSLSSNVEAEENYHLVRTHSVKSNT 1022
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1115083 1129364 - Tan0005306.1 Tan02g0112 742738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0112 1022 Pfam Malectin domain 419 602 IPR021720 -
Tan02g0112 1022 ProSitePatterns Protein kinases ATP-binding region signature. 685 707 IPR017441 GO:0005524(InterPro)
Tan02g0112 1022 Pfam Protein tyrosine and serine/threonine kinase 682 896 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0112 1022 CDD STKc_IRAK 685 953 - -
Tan02g0112 1022 SUPERFAMILY L domain-like 87 369 - -
Tan02g0112 1022 ProSiteProfiles Protein kinase domain profile. 679 961 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0112 1022 SUPERFAMILY Protein kinase-like (PK-like) 664 952 IPR011009 -
Tan02g0112 1022 Pfam Leucine Rich Repeat 168 189 IPR001611 GO:0005515(InterPro)
Tan02g0112 1022 Pfam Leucine Rich Repeat 121 140 IPR001611 GO:0005515(InterPro)
Tan02g0112 1022 Pfam Leucine Rich Repeat 215 237 IPR001611 GO:0005515(InterPro)
Tan02g0112 1022 Gene3D Ribonuclease Inhibitor 236 378 IPR032675 -
Tan02g0112 1022 Gene3D Transferase(Phosphotransferase) domain 1 755 960 - -
Tan02g0112 1022 ProSitePatterns Serine/Threonine protein kinases active-site signature. 802 814 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0112 1022 Gene3D - 415 606 - -
Tan02g0112 1022 FunFam Putative LRR receptor-like serine/threonine-protein kinase 755 963 - -
Tan02g0112 1022 Gene3D Phosphorylase Kinase; domain 1 649 754 - -
Tan02g0112 1022 Gene3D Ribonuclease Inhibitor 78 235 IPR032675 -
Tan02g0112 1022 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 27 969 IPR051824 -
Tan02g0112 1022 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 649 754 - -
Tan02g0112 1022 Pfam Leucine rich repeat 288 346 IPR001611 GO:0005515(InterPro)
Tan02g0112 1022 SMART serkin_6 679 949 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0112 1022 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 237 384 - -
Tan02g0112 1022 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 417 607 - -
Tan02g0112 1022 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 43 206 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4284 Tan-Chr1:107670892 Tan02g0112 Tan-Chr2:1115083 2.80E-225 dispersed
Tan01g4289 Tan-Chr1:107748741 Tan02g0112 Tan-Chr2:1115083 3.20E-210 dispersed
Tan02g0112 Tan-Chr2:1115083 Tan02g0114 Tan-Chr2:1115083 0.00E+00 dispersed
Tan02g0112 Tan-Chr2:1115083 Tan02g0113 Tan-Chr2:1115083 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67169 PF07714 PK_Tyr_Ser-Thr 1.20E-49 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0112 - - - 0.0