Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0113 ATGCGATTGGTAGAACTCTCTTTCATGGGAAACAAATTGTCCGGCCCATTCCCAAAAGTTCTTACTAATATCACCACCCTCAGAAACCTGAGCATCGAAGGAAATCAGTTTTCTGGTCCAATTCCACCAGAGGTTGGAAAACTAGTCAATTTGGAAAAATTTGTCCTGGCATCAAATGGCTTCACCGGAGAATTGCCTAAAGCACTCAGGAAGTTGTCGAACTTAATTGATATGAGGATAAGTGACAACAACTTCTCTGGAAAGATACCTGAGTTCATTAGTAATTGGACACTGGTTGAAAAACTGCATATACAAGGCTGCTCCCTCGAGGGGCCCATACCTTCAAGTATCTCCACCATGACGAGTTTAACTGATCTGAGAATATCTGACTTAAAAGGTGGAAGGTCTCCTTTTCCACCGTTGAGCAAAATGGAATCCATGAAGACGCTGATACTTAGGAAGTGCTGGATTGTTGGAGATATCCCCAAATACATTGGGGACATGAAAAAGTTGAAAAACTTAGACCTCAGCTACAATGACTTGACTGGTGAAGTTCCTCCATCTTTTGAACGACTGGAAAAAATAGATTACATATATTTGACAGGAAACAAGCTCAATGGAATTATTCCTGGTTGGGTTTTAGGAAGCAACAAGAATGTGGATCTTTCTAACAACAACTTCACTTGGGAAAGCTCGAGCCCAGCTGAGTGTCCTCGAGGGAGTGTAAATTTAGTAGAGACTTACTCACCATCTGCAGAAAAATTAACTAGAATCCATCCCTGCCTAAAAAGGAACTTTCCGTGTTCTGCATCAAAGGAACAGCATCACTACTCTTTGCACATTAACTGTGGCGGTAAAGAAGCATTTGTAACGGGTGAAAGGTTTGAAGCGGATAGAGAAGGTGCTTCAATGTTTTATACTGGTCAGAATTGGGCTTTTAGCAGCACGGGAAGCTTTATGGACAATGATGTTGATGCCGATAACTATATCATAACAAATACATCTGCTCTTTCAAATGTCTCTGTGACTGATTCAGAGCTGTACACAAAAGCGAGAAATTCTCCTCAATCTCTTACATACTATGGGCTCTGTCTCGTAAACGGGAATTACACTGTAAAACTCCATTTTGCAGAGATCGTTTTTATAAATGACAGTTCATTCAACAGCCTTGGGAGGCGAATTTTTGATGTGTACGTTCAGGAAAAGCTGGTCCTGAAAGATTTTGATATAGAAAATGAAGCAGGGGGTACAGGAAAGCCTGTTATAAAAACATTTACTACGGTTGTCACGAGTCATACATTGAAGATCCATTTCTACTGGGCTGGAAGAGGAACAACAGGAATCCCAATTAGAGGAAATTATGGTCCTTTGATATCAGCTATTTCCGTTGATCCTAATTTTACGCCACCCAAGTACCATGTGAAGAAGAATCACACCATCATAATTATTGGGACAGCAGCAGCAGCTTTTGTTCTACTTCTTCTGGTGTTATGTATTATGAGGAGGAAGGGATGGCTGGGGGGCAAGGGATCTGTATATAAAGAGCTTAGAGGTATAGACCTGCAAACAGGATTATTTACAATAAGACAGATTAAAGCAGCCACTAAAAATTTTGATGCTGCAAACAAAGTTGGGGAAGGTGGTTTTGGTGCAGTTTACAAGGGTCTCTTGTCAGACGGTACAATAATTGCAGTCAAGCAGCTGTCATCAAAATCAAAGCAAGGAAATCGAGAATTTGTTAATGAAATAGGCATGATATCTGCACTGCAACACCCAAATCTTGTCAAGCTTTATGGATGTTGTGTTGATGGGAACCAACTAATGTTGATTTATGAATACATGGAAAATAATTGCTTATCACGTGCCCTTTTCAGAAATGACCCAGTATCTAAATTGAGGTTGGACTGGCCCACCAGGCAGAAAATCTGTCTGGGAATAGCTAGAGGTTTGGCCTATCTACATGAGGAGTCAAGATTAAAAATCGTACATAGGGATATCAAGACAAGTAATGTGTTGCTTGATAAGGATTTCAATGCTAAAATTTCTGATTTTGGTTTGGCTAAGCTTCATGAAGATGACAATACCCATATCAGCACCCGAGTTGCCGGAACCATTGGTTATATGGCACCTGAATATGCAATGCGCGGATGCTTGACCAGCAAAGCTGATGTTTATAGCTTTGGAGTTGTTGCCCTGGAAATTGTTAGCGGCAAAAGCAATACCAACTACAGGCCTAAGGAGGATTTTGTTTACCTTCTTGACTGGGCATCTGTTCTGCAAGAAAAAGGAAGCCTATTGGAGTTGGTAGACCCAGCGTTGGGCTCAGATTATTCATCAGAAGAAGCAATGGTGATGCTGAATGTGGCTCTCCTCTGCACCAACGCATCCCCAACTCTGCGCCCTCTAATGTCCCAAGTGGTCAGCATGCTCGAAGGTCGAACTCCAGTGCAAGCACTTCTTTCTGATCCAGGTTTTTCAGCCATCAATTCCAAATTAAAGGCCCTTAGAAATCACTTTTGGCAACAAATGAGCCCCACACGCAGTTTATCATTGGACGATTTCCCAAGTGATTCTTTGAGTTCAAATGTGGAGGCAGAAGAGAATTACCATCTTGTAAGAACCCATTCTGTTAAATCTAATACATGA 2646 41.35 MRLVELSFMGNKLSGPFPKVLTNITTLRNLSIEGNQFSGPIPPEVGKLVNLEKFVLASNGFTGELPKALRKLSNLIDMRISDNNFSGKIPEFISNWTLVEKLHIQGCSLEGPIPSSISTMTSLTDLRISDLKGGRSPFPPLSKMESMKTLILRKCWIVGDIPKYIGDMKKLKNLDLSYNDLTGEVPPSFERLEKIDYIYLTGNKLNGIIPGWVLGSNKNVDLSNNNFTWESSSPAECPRGSVNLVETYSPSAEKLTRIHPCLKRNFPCSASKEQHHYSLHINCGGKEAFVTGERFEADREGASMFYTGQNWAFSSTGSFMDNDVDADNYIITNTSALSNVSVTDSELYTKARNSPQSLTYYGLCLVNGNYTVKLHFAEIVFINDSSFNSLGRRIFDVYVQEKLVLKDFDIENEAGGTGKPVIKTFTTVVTSHTLKIHFYWAGRGTTGIPIRGNYGPLISAISVDPNFTPPKYHVKKNHTIIIIGTAAAAFVLLLLVLCIMRRKGWLGGKGSVYKELRGIDLQTGLFTIRQIKAATKNFDAANKVGEGGFGAVYKGLLSDGTIIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCVDGNQLMLIYEYMENNCLSRALFRNDPVSKLRLDWPTRQKICLGIARGLAYLHEESRLKIVHRDIKTSNVLLDKDFNAKISDFGLAKLHEDDNTHISTRVAGTIGYMAPEYAMRGCLTSKADVYSFGVVALEIVSGKSNTNYRPKEDFVYLLDWASVLQEKGSLLELVDPALGSDYSSEEAMVMLNVALLCTNASPTLRPLMSQVVSMLEGRTPVQALLSDPGFSAINSKLKALRNHFWQQMSPTRSLSLDDFPSDSLSSNVEAEENYHLVRTHSVKSNT 881
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1115083 1129364 - Tan0005306.2 Tan02g0113 742739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0113 881 FunFam Putative LRR receptor-like serine/threonine-protein kinase 614 822 - -
Tan02g0113 881 FunFam Leucine-rich repeat receptor protein kinase EMS1 1 92 - -
Tan02g0113 881 CDD STKc_IRAK 544 812 - -
Tan02g0113 881 ProSiteProfiles Protein kinase domain profile. 538 820 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0113 881 Pfam Protein tyrosine and serine/threonine kinase 541 755 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0113 881 Gene3D Transferase(Phosphotransferase) domain 1 614 819 - -
Tan02g0113 881 Gene3D - 274 465 - -
Tan02g0113 881 SMART serkin_6 538 808 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0113 881 Gene3D Ribonuclease Inhibitor 1 125 IPR032675 -
Tan02g0113 881 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 2 828 IPR051824 -
Tan02g0113 881 Pfam Leucine Rich Repeat 74 96 IPR001611 GO:0005515(InterPro)
Tan02g0113 881 Pfam Leucine Rich Repeat 27 48 IPR001611 GO:0005515(InterPro)
Tan02g0113 881 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 96 243 - -
Tan02g0113 881 SUPERFAMILY L domain-like 2 233 - -
Tan02g0113 881 ProSitePatterns Protein kinases ATP-binding region signature. 544 566 IPR017441 GO:0005524(InterPro)
Tan02g0113 881 Gene3D Phosphorylase Kinase; domain 1 507 613 - -
Tan02g0113 881 ProSitePatterns Serine/Threonine protein kinases active-site signature. 661 673 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0113 881 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 276 466 - -
Tan02g0113 881 SUPERFAMILY Protein kinase-like (PK-like) 523 811 IPR011009 -
Tan02g0113 881 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 508 613 - -
Tan02g0113 881 Pfam Malectin domain 278 461 IPR021720 -
Tan02g0113 881 Pfam Leucine rich repeat 147 205 IPR001611 GO:0005515(InterPro)
Tan02g0113 881 Gene3D Ribonuclease Inhibitor 126 267 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0113 Tan-Chr2:1115083 Tan05g2539 Tan-Chr5:76713709 1.90E-193 dispersed
Tan02g0112 Tan-Chr2:1115083 Tan02g0113 Tan-Chr2:1115083 0.00E+00 tandem
Tan02g0113 Tan-Chr2:1115083 Tan02g0114 Tan-Chr2:1115083 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67170 PF07714 PK_Tyr_Ser-Thr 9.00E-50 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0113 - - - 0.0